RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 A8MU76 341 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 NUAK1O60285 661 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 SNX2O60749 519 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 LIFP15018 202 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 NFKB2Q00653 900 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 MESDQ14696 234 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 ASTE1Q2TB18 679 aaPredicted RBP16.68■□□□□ 0.26
SMN2-201ENST00000380741 DCAF12Q5T6F0 453 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 ANKS6Q68DC2 871 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 WDR74Q6RFH5 385 aaPredicted RBP16.68■□□□□ 0.26
SMN2-201ENST00000380741 HERPUD2Q9BSE4 406 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 SLC12A9Q9BXP2 914 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 CEP41Q9BYV8 373 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 XPO4Q9C0E2 1151 aaKnown RBP16.68■□□□□ 0.26
SMN2-201ENST00000380741 CARD9Q9H257 536 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 STN1Q9H668 368 aaKnown RBP16.68■□□□□ 0.26
SMN2-201ENST00000380741 ARFGAP3Q9NP61 516 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 ATXN10Q9UBB4 475 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 HEY1Q9Y5J3 304 aa16.68■□□□□ 0.26
SMN2-201ENST00000380741 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMN2-201ENST00000380741 HEMK1Q9Y5R4 338 aaPredicted RBP16.68■□□□□ 0.26
SMN2-201ENST00000380741 GRID2O43424 1007 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 TMEM253P0C7T8 217 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 F3P13726 295 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 RAB15P59190 212 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 AP1B1Q10567 949 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 CLCA4Q14CN2 919 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 ZNF648Q5T619 568 aaPredicted RBP16.67■□□□□ 0.26
SMN2-201ENST00000380741 ALS2CLQ60I27 953 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 SLC9A4Q6AI14 798 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 ARHGAP22Q7Z5H3 698 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 SLC9B2Q86UD5 537 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 CACNA2D3Q8IZS8 1091 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 NCSTNQ92542 709 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 TRIB3Q96RU7 358 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 BRD8Q9H0E9 1235 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 ZFYVE1Q9HBF4 777 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 SHOC2Q9UQ13 582 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 ADGRG1Q9Y653 693 aa16.67■□□□□ 0.26
SMN2-201ENST00000380741 KIR2DS5A0A0G2JLQ3 304 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 A0A0G2JNG1 304 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 C3orf70A6NLC5 250 aaPredicted RBP16.66■□□□□ 0.26
SMN2-201ENST00000380741 ZNF487B1APH4 448 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 KIR2DS3K7RE56 304 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 RAD1O60671 282 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 WISP1O95388 367 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 SLC4A1P02730 911 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 PIRTP0C851 137 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 SFTPCP11686 197 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 SLC2A4P14672 509 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 ZNF8P17098 575 aaPredicted RBP16.66■□□□□ 0.26
SMN2-201ENST00000380741 MAPK9P45984 424 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 EPHA4P54764 986 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 KIR2DS5Q14953 304 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 ZNF569Q5MCW4 686 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 KDELC2Q7Z4H8 507 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 PHYKPLQ8IUZ5 450 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 GPR26Q8NDV2 337 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 SLC35G2Q8TBE7 412 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.66■□□□□ 0.26
SMN2-201ENST00000380741 SH3KBP1Q96B97 665 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 RTP4Q96DX8 246 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 IMP4Q96G21 291 aaKnown RBP16.66■□□□□ 0.26
SMN2-201ENST00000380741 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 OLFM3Q96PB7 478 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 TEFMQ96QE5 360 aaKnown RBP16.66■□□□□ 0.26
SMN2-201ENST00000380741 DNAJC7Q99615 494 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 CTRCQ99895 268 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 SPATA16Q9BXB7 569 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 TBC1D10AQ9BXI6 508 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 TRIM4Q9C037 500 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 OR2AG1Q9H205 316 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 DEF6Q9H4E7 631 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 CLMPQ9H6B4 373 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 PRDM8Q9NQV8 689 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 CPNE7Q9UBL6 633 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 PILRAQ9UKJ1 303 aa16.66■□□□□ 0.26
SMN2-201ENST00000380741 ZNF106Q9H2Y7 1883 aaKnown RBP16.65■□□□□ 0.26
SMN2-201ENST00000380741 APOL1O14791 398 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 SLC25A14O95258 325 aaPredicted RBP16.65■□□□□ 0.26
SMN2-201ENST00000380741 TPM3P06753 285 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 DCDC1P59894 354 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 MC2RQ01718 297 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 KCNC4Q03721 635 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 PCSK7Q16549 785 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 NPNTQ6UXI9 565 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 NT5DC3Q86UY8 548 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 OR8K1Q8NGG5 319 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 ZSCAN5AQ9BUG6 496 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.65■□□□□ 0.26
SMN2-201ENST00000380741 KLC4Q9NSK0 619 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 KLHL3Q9UH77 587 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 ZNF711Q9Y462 761 aa16.65■□□□□ 0.26
SMN2-201ENST00000380741 UBR5O95071 2799 aaPredicted RBP16.64■□□□□ 0.25
SMN2-201ENST00000380741 SSU72P8A0A1W2PR75 194 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 OR5K4A6NMS3 321 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 AKR1B10O60218 316 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 CLCNKAP51800 687 aa16.64■□□□□ 0.25
SMN2-201ENST00000380741 UBE2IP63279 158 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms