RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MYO19Q96H55 970 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 DNAAF2Q9NVR5 837 aaKnown RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 LILRB3O75022 631 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 VPS4BO75351 444 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 SORBS2O94875 1100 aaKnown RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 SIX3O95343 332 aaPredicted RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 SNRPB2P08579 225 aaKnown RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 TSPAN8P19075 237 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 CA8P35219 290 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 CDKN1CP49918 316 aaPredicted RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 CLCQ05315 142 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 PTK2BQ14289 1009 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 AGKQ53H12 422 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 RNF220Q5VTB9 566 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 ZFP1Q6P2D0 407 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 EFL1Q7Z2Z2 1120 aaKnown RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
VPS16-202ENST00000380445 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 GCNAQ96QF7 691 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 C1QTNF3Q9BXJ4 246 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 WBP1LQ9NX94 342 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 DNAJC15Q9Y5T4 150 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
VPS16-202ENST00000380445 CXorf51AA0A1B0GTR3 108 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 PDLIM1O00151 329 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 BTN3A1O00481 513 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 ECI2O75521 394 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 MLYCDO95822 493 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 PFKLP17858 780 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.4
VPS16-202ENST00000380445 XIAPP98170 497 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 CDC16Q13042 620 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 FLOT2Q14254 428 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 TSNQ15631 228 aaKnown RBP12.52□□□□□ -0.4
VPS16-202ENST00000380445 ATXN7L2Q5T6C5 722 aaPredicted RBP12.52□□□□□ -0.4
VPS16-202ENST00000380445 KANK2Q63ZY3 851 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 PAF1Q8N7H5 531 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 HIPK4Q8NE63 616 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.4
VPS16-202ENST00000380445 SMIM14Q96QK8 99 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 NPAS2Q99743 824 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 CCDC167Q9P0B6 97 aa12.52□□□□□ -0.4
VPS16-202ENST00000380445 TRAV19A0A0A6YYK7 116 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 PRMT5O14744 637 aaPredicted RBP12.52□□□□□ -0.41
VPS16-202ENST00000380445 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
VPS16-202ENST00000380445 GIPC1O14908 333 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 KLK8O60259 260 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 SOCS5O75159 536 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CRCPO75575 148 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 TIMP1P01033 207 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CTSAP10619 480 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CD1EP15812 388 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 ZXDBP98169 803 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 GSTA3Q16772 222 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 PPP1R3AQ16821 1122 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 GK5Q6ZS86 529 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 TWIST2Q8WVJ9 160 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 DLG3Q92796 817 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 ECSITQ9BQ95 431 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 VCXQ9H320 206 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 APPL1Q9UKG1 709 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
VPS16-202ENST00000380445 GBF1Q92538 1859 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 TGM5O43548 720 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 OR1I1O60431 355 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 SNX2O60749 519 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 NIPSNAP2O75323 286 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 BAIAP3O94812 1187 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 IGSF6O95976 241 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CHEK2O96017 543 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 MT-CO1P00395 513 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CYBBP04839 570 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 RPS17P08708 135 aaKnown RBP12.52□□□□□ -0.41
VPS16-202ENST00000380445 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 ZNF7P17097 686 aaPredicted RBP12.52□□□□□ -0.41
VPS16-202ENST00000380445 THOP1P52888 689 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CTSL3PQ5NE16 218 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 LYPLAL1Q5VWZ2 237 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 GAREM2Q75VX8 874 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 KBTBD2Q8IY47 623 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 APCDD1Q8J025 514 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 TTC16Q8NEE8 873 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 WFDC5Q8TCV5 224 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 CD200R1Q8TD46 325 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 TM6SF2Q9BZW4 377 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 ZBP1Q9H171 429 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 AKTIPQ9H8T0 292 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
VPS16-202ENST00000380445 C6orf203Q9P0P8 240 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms