RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TOP1MTQ969P6 601 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 FAM149B1Q96BN6 582 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CDCA5Q96FF9 252 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 C12orf57Q99622 126 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 NPAS2Q99743 824 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 FRMD8P1Q9BZ68 369 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PPA2Q9H2U2 334 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PCDH9Q9HC56 1237 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 MRPL47Q9HD33 250 aaKnown RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 IFT46Q9NQC8 304 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TMLHEQ9NVH6 421 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TINAGQ9UJW2 476 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PSAT1Q9Y617 370 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 EI24O14681 340 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 HNRNPDLO14979 420 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SLC16A4O15374 487 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GREM1O60565 184 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TSHRP16473 764 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF30P17039 623 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 NPR3P17342 541 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PROZP22891 400 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PTX3P26022 381 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GRK3P35626 688 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 RGS7P49802 495 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TAS2R40P59535 323 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 FMO1Q01740 532 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PIGFQ07326 219 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 FAPQ12884 760 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ELOAQ14241 798 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PSMD5Q16401 504 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 DRICH1Q6PGQ1 229 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TAB3Q8N5C8 712 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ST13P5Q8NFI4 369 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 BEST2Q8NFU1 509 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SGK3Q96BR1 496 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 B3GALT6Q96L58 329 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 BEX2Q9BXY8 128 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 IKZF4Q9H2S9 585 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 NECTIN3Q9NQS3 549 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TRMT6Q9UJA5 497 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ACAD8Q9UKU7 415 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 EMCNQ9ULC0 261 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 DERAQ9Y315 318 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TRAV20A0A0B4J274 112 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GLTPD2A6NH11 291 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 AGAP5A6NIR3 686 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ST8SIA5O15466 376 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 RASAL1O95294 804 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SERPINE1P05121 402 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PROS1P07225 676 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TRIM49P0CI25 452 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TRIM49CP0CI26 452 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 IL10P22301 178 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 UBA1P22314 1058 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 CRHBPP24387 322 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ADARB1P78563 741 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 UGCGQ16739 394 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 LIN9Q5TKA1 542 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TXNDC11Q6PKC3 985 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 STRADAQ7RTN6 431 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 R3HCC1LQ7Z5L2 792 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PBXIP1Q96AQ6 731 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 NECTIN4Q96NY8 510 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 BBS2Q9BXC9 721 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PRRG3Q9BZD7 231 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 REXO4Q9GZR2 422 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 OR51B5Q9H339 312 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TM9SF3Q9HD45 589 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 UBE2TQ9NPD8 197 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TOPORSQ9NS56 1045 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 TMEM39AQ9NV64 488 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PRMT7Q9NVM4 692 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SMPD3Q9NY59 655 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 OAZ3Q9UMX2 235 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GMPPBQ9Y5P6 360 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GOLGB1Q14789 3259 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 A0A1W2PRG6 482 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 HMX2A2RU54 273 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 DDX39AO00148 427 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 MUSKO15146 869 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 C7P10643 843 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ACADMP11310 421 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 POU2F1P14859 743 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SHMT2P34897 504 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GABRB2P47870 512 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PSMD8P48556 350 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SNRPD2P62316 118 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 CSTF3Q12996 717 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 KRR1Q13601 381 aaKnown RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 KCNJ11Q14654 390 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 MFSD10Q14728 455 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PCLAFQ15004 111 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 GPAT3Q53EU6 434 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 C1orf220Q5T0J3 134 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 FAXCQ5TGI0 409 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PLA2G4FQ68DD2 849 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms