RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 GDPD5Q8WTR4 605 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 RSPRY1Q96DX4 576 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 SHCBP1LQ9BZQ2 653 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 CCDC68Q9H2F9 335 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 SUV39H2Q9H5I1 410 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 ACSS2Q9NR19 701 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 APOBEC2Q9Y235 224 aaKnown RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 MTF2Q9Y483 593 aaPredicted RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 C1orf232A0A0U1RR37 186 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 PFDN6O15212 129 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 SRP72O76094 671 aaKnown RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 CLDN7O95471 211 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 POP4O95707 220 aaKnown RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 RBP1P09455 135 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 TTPAP49638 278 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 TAS2R42Q7RTR8 314 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 KIAA0907Q7Z7F0 614 aaPredicted RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 SIKE1Q9BRV8 207 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 EBF3Q9H4W6 596 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 CEP290O15078 2479 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 GBF1Q92538 1859 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 A8MX80 341 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 PDE5AO76074 875 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 IDH3AP50213 366 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 RAD51Q06609 339 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 CDKN3Q16667 212 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 GEN1Q17RS7 908 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 TECRLQ5HYJ1 363 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 PPP2R2DQ66LE6 453 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 AHI1Q8N157 1196 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 GBP5Q96PP8 586 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 CPEB1Q9BZB8 566 aaKnown RBP19.3■□□□□ 0.68
SSU72-204ENST00000378726 LMAN2LQ9H0V9 348 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 IGFLR1Q9H665 355 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 ZDHHC6Q9H6R6 413 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 SFXN1Q9H9B4 322 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 VPS9D1Q9Y2B5 631 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 SLC30A1Q9Y6M5 507 aa19.3■□□□□ 0.68
SSU72-204ENST00000378726 RNASEH1O60930 286 aaKnown RBP19.29■□□□□ 0.68
SSU72-204ENST00000378726 RHOBTB1O94844 696 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 SUOXP51687 545 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 PDAP1Q13442 181 aaKnown RBP19.29■□□□□ 0.68
SSU72-204ENST00000378726 KCNC3Q14003 757 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 CCNIQ14094 377 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 PTPRNQ16849 979 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 VWA5B1Q5TIE3 1220 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 AAGABQ6PD74 315 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 Q6ZVU0 165 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 OSCP1Q8WVF1 389 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 DRC3Q9H069 523 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 POPDC3Q9HBV1 291 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 FBXO10Q9UK96 956 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 ERVW-1Q9UQF0 538 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 FAM50BQ9Y247 325 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.29■□□□□ 0.68
SSU72-204ENST00000378726 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.29■□□□□ 0.68
SSU72-204ENST00000378726 TRANK1O15050 2925 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 OR1I1O60431 355 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 ATP5F1P24539 256 aaPredicted RBP19.29■□□□□ 0.68
SSU72-204ENST00000378726 COPAP53621 1224 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 LRRC36Q1X8D7 754 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 FAM78AQ5JUQ0 283 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 ISCA2Q86U28 154 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 ZNF781Q8N8C0 355 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 CYB5D2Q8WUJ1 264 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 ZFAND2BQ8WV99 257 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 SORCS1Q8WY21 1168 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 APOL5Q9BWW9 433 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 TAS2R13Q9NYV9 303 aa19.29■□□□□ 0.68
SSU72-204ENST00000378726 CAPN8A6NHC0 703 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 CCNT2O60583 730 aaKnown RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 CYP17A1P05093 508 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 TFEBP19484 476 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 CACNG1Q06432 222 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ASPHQ12797 758 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 EML3Q32P44 896 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 AARS2Q5JTZ9 985 aaKnown RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 RARS2Q5T160 578 aaKnown RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 LPCAT4Q643R3 524 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ADGRG6Q86SQ4 1221 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 DHDDSQ86SQ9 333 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 PDSS2Q86YH6 399 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 NPAS3Q8IXF0 933 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 EFCAB3Q8N7B9 438 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 CHST14Q8NCH0 376 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 PPP2R3CQ969Q6 453 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ECHDC3Q96DC8 303 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 SCRN2Q96FV2 425 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 BIRC8Q96P09 236 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 STN1Q9H668 368 aaKnown RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 MSRAQ9UJ68 235 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 NEMP2A6NFY4 417 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ZNF195O14628 629 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 PAPLNO95428 1278 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 ADH5P11766 374 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 PKMP14618 531 aaKnown RBP19.28■□□□□ 0.68
SSU72-204ENST00000378726 FSHRP23945 695 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 KCNC1P48547 511 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 PFKPQ01813 784 aa19.28■□□□□ 0.68
SSU72-204ENST00000378726 SEMG2Q02383 582 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms