RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SERPINA3P01011 423 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SEPHS1P49903 392 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 NRLP54845 237 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 RAB2AP61019 212 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ATP13A5Q4VNC0 1218 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 C10orf107Q8IVU9 208 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 COQ8BQ96D53 544 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 IFT46Q9NQC8 304 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 DISP2A7MBM2 1401 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 C9J4A7 227 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 CHADO15335 359 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ALOX5P09917 674 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ANPEPP15144 967 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SLC26A3P40879 764 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ELP6Q0PNE2 266 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 GRM2Q14416 872 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 GRIK5Q16478 980 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SLC34A3Q8N130 599 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 DCBLD1Q8N8Z6 715 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 TOP1MTQ969P6 601 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 PRDM12Q9H4Q4 367 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 DCLRE1BQ9H816 532 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 FAM237BA0A1B0GVD1 139 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 OR6C75A6NL08 312 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SLC6A9P48067 706 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 COL9A2Q14055 689 aaPredicted RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 PTGES3Q15185 160 aaKnown RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SLC24A5Q71RS6 500 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ZBTB2Q8N680 514 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SLC25A23Q9BV35 468 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 WDR18Q9BV38 432 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 MEGF6O75095 1541 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SUV39H1O43463 412 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 PGM3O95394 542 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 YAP1P46937 504 aaKnown RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ACTR3P61158 418 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 MSLNQ13421 630 aaPredicted RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ADRM1Q16186 407 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 TMC8Q8IU68 726 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 OR52J3Q8NH60 311 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 HIC2Q96JB3 615 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 TSSK3Q96PN8 268 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 MECRQ9BV79 373 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ABCB10Q9NRK6 738 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 HNRNPH1P31943 449 aaKnown RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 PUM1Q14671 1186 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ZCCHC12Q6PEW1 402 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ADAMTSL2Q86TH1 951 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ERVW-1Q9UQF0 538 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ACTL7BQ9Y614 415 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 DIP2BQ9P265 1576 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 A0A0G2JN53 185 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 A0A1W2PRU2 124 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 FAM227AF5H4B4 570 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 TNFP01375 233 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 C8AP07357 584 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ATXN7L2Q5T6C5 722 aaPredicted RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 MON1AQ86VX9 555 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 CLIP4Q8N3C7 705 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 GLIS3Q8NEA6 775 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 LEF1Q9UJU2 399 aaPredicted RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 SSR3Q9UNL2 185 aa14.03□□□□□ -0.16
TRIM13-202ENST00000378182 CFAP20Q9Y6A4 193 aaKnown RBP14.03□□□□□ -0.16
TRIM13-202ENST00000378182 ZBTB22O15209 634 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 PRNPP04156 253 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 SLC35G6P0C7Q6 338 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 ADRA1DP25100 572 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 SLC7A1P30825 629 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 MAPK12P53778 367 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 INAVAQ3KP66 663 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 ARSIQ5FYB1 569 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 TMC3Q7Z5M5 1100 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 MPP5Q8N3R9 675 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 RDH11Q8TC12 318 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 MRPS30Q9NP92 439 aaKnown RBP14.02□□□□□ -0.16
TRIM13-202ENST00000378182 ADGRE2Q9UHX3 823 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 ICAM3P32942 547 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 RPIAP49247 311 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 CDH13P55290 713 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 GRM3Q14832 879 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 SULT1C3Q6IMI6 304 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 KYAT3Q6YP21 454 aaKnown RBP14.02□□□□□ -0.16
TRIM13-202ENST00000378182 EFHD2Q96C19 240 aaPredicted RBP14.02□□□□□ -0.16
TRIM13-202ENST00000378182 VCPIP1Q96JH7 1222 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 TBC1D24Q9ULP9 559 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 TBC1D30Q9Y2I9 924 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.16
TRIM13-202ENST00000378182 FAM86C2PA6NEL3 165 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 FAM153BP0C7A2 387 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 SPAM1P38567 509 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 EIF1AXP47813 144 aaKnown RBP14.02□□□□□ -0.16
TRIM13-202ENST00000378182 NAB1Q13506 487 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 SEC23AQ15436 765 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 FAM153CQ494X1 144 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 RALGPS2Q86X27 583 aaPredicted RBP14.02□□□□□ -0.16
TRIM13-202ENST00000378182 TMPRSS6Q8IU80 811 aa14.02□□□□□ -0.16
TRIM13-202ENST00000378182 B3GALT2O43825 422 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms