RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 GALNT1Q10472 559 aaPredicted RBP16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 SLC14A2Q15849 920 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 ZNF678Q5SXM1 525 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 OVOS1Q6IE37 1185 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 CD300LGQ6UXG3 332 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 RYBPQ8N488 228 aaPredicted RBP16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 TMCO5AQ8N6Q1 288 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 PDPRQ8NCN5 879 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 AGO3Q9H9G7 860 aaKnown RBP16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 GIN1Q9NXP7 522 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 ABCD2Q9UBJ2 740 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 DAPK2Q9UIK4 370 aa16.52■□□□□ 0.24
PCDHA1-201ENST00000378133 TRPM7Q96QT4 1865 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 A0A1W2PQH9 124 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 BBIP1A8MTZ0 92 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 INPP4BO15327 924 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 B4GAT1O43505 415 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 S1PR4O95977 384 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 ITGB1P05556 798 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 MBL2P11226 248 aaPredicted RBP16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 FCGR1AP12314 374 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 HSD17B1P14061 328 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 GPX3P22352 226 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 HOXC8P31273 242 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 HTR7P34969 479 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 RENBPP51606 427 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 BFSP2Q13515 415 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 UNC50Q53HI1 259 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 MORN1Q5T089 497 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 PIK3R6Q5UE93 754 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 PRMT9Q6P2P2 845 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 ZNF773Q6PK81 442 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 GOLM1Q8NBJ4 401 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 SNX19Q92543 992 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 HMCESQ96FZ2 354 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 OSER1Q9NX31 292 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 GIMAP2Q9UG22 337 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 PTGDR2Q9Y5Y4 395 aa16.52■□□□□ 0.23
PCDHA1-201ENST00000378133 ARPC2O15144 300 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 OR4Q2P0C623 313 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 ATP4BP51164 291 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 MLLT10P55197 1068 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 RPS3AP61247 264 aaKnown RBP16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SH3BP2P78314 561 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 MARC1Q5VT66 337 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SCN4BQ8IWT1 228 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SCAIQ8N9R8 606 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 GABPB2Q8TAK5 448 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 RAB2BQ8WUD1 216 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 PTERQ96BW5 349 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 C19orf60Q96EN9 201 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 NRBF2Q96F24 287 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 AKTIPQ9H8T0 292 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 ATP13A1Q9HD20 1204 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 CMTM6Q9NX76 183 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 MYADML2A6NDP7 307 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 TNFRSF10BO14763 440 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 ANGPT2O15123 496 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SEC14L2O76054 403 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 CYP11A1P05108 521 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 GFAPP14136 432 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 NFKBIAP25963 317 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 ELK4P28324 431 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 HUNKP57058 714 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SMUG1Q53HV7 270 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 LDLRAP1Q5SW96 308 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SDHAF4Q5VUM1 108 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SPATA2LQ8IUW3 424 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 MINDY1Q8N5J2 469 aa16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 KIAA1522Q9P206 1035 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-201ENST00000378133 SIX3O95343 332 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 GPIP06744 558 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 MMP2P08253 660 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 MTHFD1P11586 935 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 RFC2P35250 354 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 YBX1P67809 324 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 PTPRCAPQ14761 206 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 UGT3A2Q3SY77 523 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 USP51Q70EK9 711 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 IFNEQ86WN2 208 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 LRRC49Q8IUZ0 686 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 SFRP1Q8N474 314 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 RPL10LQ96L21 214 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 RAD21L1Q9H4I0 556 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 GPN2Q9H9Y4 310 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 CPQQ9Y646 472 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 LRRC14BA6NHZ5 514 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 C9JVG2 144 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC7A4O43246 635 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 CNTN5O94779 1100 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 KPNA1P52294 538 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 ADARB1P78563 741 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 TSPY1Q01534 308 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 GEN1Q17RS7 908 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms