RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CFAP206Q8IYR0 622 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TBC1D3Q8IZP1 549 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 ZSWIM3Q96MP5 696 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 FCRL5Q96RD9 977 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SLC6A17Q9H1V8 727 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 KDM4CQ9H3R0 1056 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 NOL6Q9H6R4 1146 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 BRD9Q9H8M2 597 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SDK2Q58EX2 2172 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 GLYATL1P3A0A0U1RQE8 302 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 MAGEB16A2A368 324 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TNFRSF10BO14763 440 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PIP5K1BO14986 540 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 XYLBO75191 536 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 FKBP9O95302 570 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SLC35E2BP0CK96 405 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 HOXD8P13378 290 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 ALADP13716 330 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 ZNF7P17097 686 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 GCKP35557 465 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 GPR1P46091 355 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 IDH3AP50213 366 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 DIO3P55073 304 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CDH4P55283 916 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 FOXA1P55317 472 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SNRPD1P62314 119 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PLOD1Q02809 727 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 INSCQ1MX18 579 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 LRRC23Q53EV4 343 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 KRT80Q6KB66 452 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 ANKRD26P1Q6NSI1 321 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CD300LGQ6UXG3 332 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 KYAT3Q6YP21 454 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 FKBP9P1Q75LS8 142 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SFTPA1Q8IWL2 248 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SUGP1Q8IWZ8 645 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PHC3Q8NDX5 983 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 OR14C36Q8NHC7 312 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 IRGQQ8WZA9 623 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TMEM159Q96B96 161 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CMTM5Q96DZ9 223 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 OTUB1Q96FW1 271 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 VPS50Q96JG6 964 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PRICKLE1Q96MT3 831 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 YIPF2Q9BWQ6 316 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TRIM54Q9BYV2 358 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 DEC1Q9P2X7 70 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TRAF6Q9Y4K3 522 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 INSL6Q9Y581 213 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 USP34Q70CQ2 3546 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 MRASO14807 208 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 HDAC3O15379 428 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PSMD3O43242 534 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 DNAJC8O75937 253 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PKMP14618 531 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CALB2P22676 271 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PIK3R1P27986 724 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 GDI1P31150 447 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PPARGP37231 505 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CCR2P41597 374 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 GRIA3P42263 894 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 ARCN1P48444 511 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 RNF144AP50876 292 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 SLC7A2P52569 658 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PRKAG1P54619 331 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PARP15Q460N3 678 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 LIPMQ5VYY2 423 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 MBLAC2Q68D91 279 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 PM20D1Q6GTS8 502 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 LILRA3Q8N6C8 439 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 BHLHE22Q8NFJ8 381 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 OR52B6Q8NGF0 335 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 FBXO30Q8TB52 745 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 CYGBQ8WWM9 190 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 TOP1MTQ969P6 601 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 OTULINQ96BN8 352 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 C8orf48Q96LL4 319 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 UHRF1Q96T88 793 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 COPS8Q99627 209 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 OSBPL2Q9H1P3 480 aa8.05□□□□□ -1.12
CKAP2-203ENST00000378037 EML4Q9HC35 981 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 GEMIN8Q9NWZ8 242 aaKnown RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 RCOR3Q9P2K3 495 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 POLR3HQ9Y535 204 aaPredicted RBP8.05□□□□□ -1.12
CKAP2-203ENST00000378037 A8MT66 165 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 TRAFD1O14545 582 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 LEFTY1O75610 366 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 RPP40O75818 363 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 WDR47O94967 919 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ZNF682O95780 498 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 FGF1P05230 155 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CAPN1P07384 714 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ATP5F1P24539 256 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 GRK2P25098 689 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 KCNC1P48547 511 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 METAP1P53582 386 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PRKAA1Q13131 559 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 SEMA3AQ14563 771 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms