RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TUBD1Q9UJT1 453 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 LILRA5A6NI73 299 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 AGRPO00253 132 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 APOL1O14791 398 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 GRID2O43424 1007 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 AKR1B10O60218 316 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 NUAK1O60285 661 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 RAD1O60671 282 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 WISP1O95388 367 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 PRLP01236 227 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 JCHAINP01591 159 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 ACP5P13686 325 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 VCLP18206 1134 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 KDELR1P24390 212 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 CASP14P31944 242 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 UGT1A3P35503 534 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 CSRP3P50461 194 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 NIPAL4Q0D2K0 466 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 TBR1Q16650 682 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 QPCTQ16769 361 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 LRRC38Q5VT99 294 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 ZDHHC20Q5W0Z9 365 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 NT5DC3Q86UY8 548 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 NLGN4XQ8N0W4 816 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 PQLC3Q8N755 202 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 NLGN4YQ8NFZ3 816 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-204ENST00000376643 OR8K1Q8NGG5 319 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 PTCD2Q8WV60 388 aaKnown RBP14.6□□□□□ -0.07
HDAC6-204ENST00000376643 SPATA16Q9BXB7 569 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 MAGEE1Q9HCI5 957 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 TRIM39Q9HCM9 518 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 FBXO8Q9NRD0 319 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 IFNKQ9P0W0 207 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 NENFQ9UMX5 172 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 ST14Q9Y5Y6 855 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 B3GALT1Q9Y5Z6 326 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 ATMQ13315 3056 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 CFAP46Q8IYW2 2715 aa14.6□□□□□ -0.07
HDAC6-204ENST00000376643 TOX3O15405 576 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-204ENST00000376643 VEGFDO43915 354 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 SLC25A14O95258 325 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-204ENST00000376643 ATP1A1P05023 1023 aaKnown RBP14.59□□□□□ -0.07
HDAC6-204ENST00000376643 SLC1A1P43005 524 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 CCR10P46092 362 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 MC2RQ01718 297 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 AP1B1Q10567 949 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 NFATC2Q13469 925 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 PTPRRQ15256 657 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 ATP13A4Q4VNC1 1196 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 RFLNAQ6ZTI6 216 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 TRIM48Q8IWZ4 208 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 RBM12BQ8IXT5 1001 aaKnown RBP14.59□□□□□ -0.07
HDAC6-204ENST00000376643 TRAM1L1Q8N609 369 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 EXD3Q8N9H8 876 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 NCSTNQ92542 709 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 AGAP2Q99490 1192 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 SLC25A18Q9H1K4 315 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
HDAC6-204ENST00000376643 CPNE7Q9UBL6 633 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 TBC1D29Q9UFV1 150 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 KCNK6Q9Y257 313 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 PLEKHM1Q9Y4G2 1056 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 HEY1Q9Y5J3 304 aa14.59□□□□□ -0.07
HDAC6-204ENST00000376643 SPTA1P02549 2419 aa14.58□□□□□ -0.07
HDAC6-204ENST00000376643 KCNK1O00180 336 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 KMOO15229 486 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 MTSS1O43312 755 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 SNX2O60749 519 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 KCNJ13O60928 360 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 ANKRD34CP0C6C1 535 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 FAM87AP0C7U9 286 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 TAS2R40P59535 323 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 MAP7Q14244 749 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 MESDQ14696 234 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 SLC9A4Q6AI14 798 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 ARHGAP22Q7Z5H3 698 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 IMP4Q96G21 291 aaKnown RBP14.58□□□□□ -0.08
HDAC6-204ENST00000376643 SLC45A3Q96JT2 553 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 CCDC42Q96M95 316 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 TIMM29Q9BSF4 260 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 SLC12A9Q9BXP2 914 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 GPR63Q9BZJ6 419 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 ZCCHC2Q9C0B9 1178 aaKnown RBP14.58□□□□□ -0.08
HDAC6-204ENST00000376643 SLC25A51Q9H1U9 297 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 OSGEPL1Q9H4B0 414 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 GPN2Q9H9Y4 310 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-204ENST00000376643 POT1Q9NUX5 634 aa14.58□□□□□ -0.08
HDAC6-204ENST00000376643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC6-204ENST00000376643 CNOT6Q9ULM6 557 aaKnown RBP14.58□□□□□ -0.08
HDAC6-204ENST00000376643 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
HDAC6-204ENST00000376643 FLNBO75369 2602 aaKnown RBP14.57□□□□□ -0.08
HDAC6-204ENST00000376643 TRBV23OR9-2A0A075B6M9 112 aa14.57□□□□□ -0.08
HDAC6-204ENST00000376643 A0A0U1RQS6 177 aa14.57□□□□□ -0.08
HDAC6-204ENST00000376643 A6NCN8 305 aa14.57□□□□□ -0.08
HDAC6-204ENST00000376643 FADS2P1A8MWK0 482 aa14.57□□□□□ -0.08
HDAC6-204ENST00000376643 POLR1CO15160 346 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-204ENST00000376643 VIPP01282 170 aa14.57□□□□□ -0.08
HDAC6-204ENST00000376643 XRCC1P18887 633 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-204ENST00000376643 MPSTP25325 297 aa14.57□□□□□ -0.08
HDAC6-204ENST00000376643 MAPK9P45984 424 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms