RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 DIO3P55073 304 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 FAM189BP81408 668 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 MERTKQ12866 999 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TAF1CQ15572 869 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CLLU1OSQ5K130 101 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 ANKS6Q68DC2 871 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 KRT80Q6KB66 452 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TXNDC11Q6PKC3 985 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CIR1Q86X95 450 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 FBXO39Q8N4B4 442 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 FAM47BQ8NA70 645 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 B4GALNT2Q8NHY0 566 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 PPWD1Q96BP3 646 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TUBGCP3Q96CW5 907 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CCDC97Q96F63 343 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 SPATA17Q96L03 361 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TEX37Q96LM6 180 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CAAP1Q9H8G2 361 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CD320Q9NPF0 282 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TAS2R13Q9NYV9 303 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 MARCH2Q9P0N8 246 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CIDEBQ9UHD4 219 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 PCTPQ9UKL6 214 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 ZNF232Q9UNY5 417 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 SERPINF2P08697 491 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 GNAO1P09471 354 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 PRSS56P0CW18 603 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 UROSP10746 265 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 FCGR1AP12314 374 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 APLP1P51693 650 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 EEFSECP57772 596 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CAPRIN1Q14444 709 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TAF1AQ15573 450 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 MFSD4BQ5TF39 518 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 RYBPQ8N488 228 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 FAM81AQ8TBF8 368 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 DIS3LQ8TF46 1054 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 RPRD1AQ96P16 312 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 ADI1Q9BV57 179 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 DDX18Q9NVP1 670 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 RNF112Q9ULX5 631 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 SPO11Q9Y5K1 396 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CCDC160A6NGH7 325 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TRIM64BA6NI03 449 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 SYCE1LA8MT33 242 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 COQ9O75208 318 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 PRLP01236 227 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CHRM3P20309 590 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 RFC2P35250 354 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 GSK3BP49841 420 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 CACNB2Q08289 660 aaPredicted RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 PAGE3Q5JUK9 113 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TMTC4Q5T4D3 741 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 AFTPHQ6ULP2 937 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 USP51Q70EK9 711 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 EFL1Q7Z2Z2 1120 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 SYVN1Q86TM6 617 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 DDIASQ8IXT1 998 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TMEM199Q8N511 208 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 NKAPQ8N5F7 415 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TTC9BQ8N6N2 239 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 MDGA1Q8NFP4 955 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TNIP2Q8NFZ5 429 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 EXT2Q93063 718 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 PSKH2Q96QS6 385 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 MAGEH1Q9H213 219 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 ZFYVE28Q9HCC9 887 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 TLR8Q9NR97 1041 aaKnown RBP10.6□□□□□ -0.71
ABCF1-202ENST00000376545 EGFL7Q9UHF1 273 aa10.6□□□□□ -0.71
ABCF1-202ENST00000376545 H3BNC9 293 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 VNN2O95498 520 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 TACR2P21452 398 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 HTR1EP28566 365 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 RAD51Q06609 339 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 ZNF235Q14590 738 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 ZBED5Q49AG3 693 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 LRRC23Q53EV4 343 aaPredicted RBP10.59□□□□□ -0.71
ABCF1-202ENST00000376545 CST9Q5W186 159 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 KIAA2013Q8IYS2 634 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 DPP10Q8N608 796 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 OR2T11Q8NH01 316 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 FBXO32Q969P5 355 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.711e-8■■□□□ 13
ABCF1-202ENST00000376545 MUC3BQ9H195 1237 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 ALG2Q9H553 416 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 IL1RL2Q9HB29 575 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 ZIM2Q9NZV7 527 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 GALPQ9UBC7 116 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 BTRCQ9Y297 605 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
ABCF1-202ENST00000376545 A0A087WXM4 84 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
ABCF1-202ENST00000376545 SAC3D1A6NKF1 404 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 SUPT3HB4E1H0 165 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 SUPT3HO75486 399 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 RHOBTB1O94844 696 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 MLYCDO95822 493 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 F11P03951 625 aa10.59□□□□□ -0.71
ABCF1-202ENST00000376545 ASGR1P07306 291 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms