RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 MTHFD2P13995 350 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 LBPP18428 481 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 CDC42EP1Q00587 391 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 DSC2Q02487 901 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 NFATC3Q12968 1075 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 PAN2Q504Q3 1202 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 DCP1BQ8IZD4 617 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 SLC15A4Q8N697 577 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 BPIFB6Q8NFQ5 453 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 SEMA4BQ9NPR2 832 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 TLR9Q9NR96 1032 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 PKD2L2Q9NZM6 624 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 ANAPC2Q9UJX6 822 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 GJB3O75712 270 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 GPIP06744 558 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 FGF4P08620 206 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 PORP16435 677 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 MAP4P27816 1152 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 AXLP30530 894 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 TMEM214Q6NUQ4 689 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 TFAP2DQ7Z6R9 452 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 NAT16Q8N8M0 369 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 BIRC7Q96CA5 298 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 TBATAQ96M53 351 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 MIOSQ9NXC5 875 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 ST3GAL5Q9UNP4 418 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 SNAP91O60641 907 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 LDLRP01130 860 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 LHX1P48742 406 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 MLLT10P55197 1068 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 UFM1P61960 85 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 ADARB1P78563 741 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 SLC10A7Q0GE19 358 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 POLD3Q15054 466 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 KANK2Q63ZY3 851 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 ITIH5Q86UX2 942 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 KIAA2013Q8IYS2 634 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 CASP10Q92851 521 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 LPPQ93052 612 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 GLT1D1Q96MS3 346 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 RNF145Q96MT1 663 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 GAD1Q99259 594 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 CHID1Q9BWS9 393 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 CATSPERBQ9H7T0 1116 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 LTB4R2Q9NPC1 389 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 TMLHEQ9NVH6 421 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 GPR45Q9Y5Y3 372 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 TTC3P53804 2025 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 NYNRINQ9P2P1 1898 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 PRSS56P0CW18 603 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 PRDX3P30048 256 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 CCR1P32246 355 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 TTKP33981 857 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 SHMT2P34897 504 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 HLCSP50747 726 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 MOGQ16653 247 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 CCNYL2Q5T2Q4 361 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 USP51Q70EK9 711 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 RALGPS2Q86X27 583 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 NUDT8Q8WV74 236 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 SNX19Q92543 992 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 DEFB118Q96PH6 123 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 RTP3Q9BQQ7 232 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 SLC25A51Q9H1U9 297 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 NOL6Q9H6R4 1146 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 EVLQ9UI08 416 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 NOD1Q9Y239 953 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 PCDHGA4Q9Y5G9 962 aa14.03□□□□□ -0.16
CLCNKA-202ENST00000375692 C1orf232A0A0U1RR37 186 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 A0A1W2PP18 115 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 TMEM221A6NGB7 291 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 CASTOR2A6NHX0 329 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 IRAK2O43187 625 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 CAPN15O75808 1086 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 MATN4O95460 622 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 PEX11BO96011 259 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 CCNA2P20248 432 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 NR4A1P22736 598 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 OR4D2P58180 307 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 NFKB2Q00653 900 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 SEMA3AQ14563 771 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 MANEALQ5VSG8 457 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 GALNT18Q6P9A2 607 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF354CQ86Y25 554 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 OR13F1Q8NGS4 319 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 IMP4Q96G21 291 aaKnown RBP14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 TMEM209Q96SK2 561 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 CSF3RQ99062 836 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 C1orf50Q9BV19 199 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 ARNT2Q9HBZ2 717 aa14.02□□□□□ -0.16
CLCNKA-202ENST00000375692 INTS10Q9NVR2 710 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms