RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 MYL9P24844 172 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 SRP54P61011 504 aaKnown RBP21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 SKP1P63208 163 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 ZFP69Q49AA0 526 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 NADK2Q4G0N4 442 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 RHBDF2Q6PJF5 856 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 OR4K2Q8NGD2 314 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 PPCDCQ96CD2 204 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 CCDC3Q9BQI4 270 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 PDGFDQ9GZP0 370 aaPredicted RBP21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 GPR25O00155 361 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 PLSCR1O15162 318 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 NDST2P52849 883 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 CYP4F2P78329 520 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 CYP4F3Q08477 520 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 FZD8Q9H461 694 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 TRIM39Q9HCM9 518 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 DNAJC11Q9NVH1 559 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 OGDHLQ9ULD0 1010 aa21.06■□□□□ 0.96
TGFBR1-202ENST00000374994 ADAMDEC1O15204 470 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 POLR2EP19388 210 aaKnown RBP21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 TOR4AQ9NXH8 423 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 CACNG1Q06432 222 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 GATAD2AQ86YP4 633 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 GPR21Q99679 349 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 FAM105AQ9NUU6 356 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 TSPAN1O60635 241 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 PRKCHP24723 683 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 PSMA1P25786 263 aaKnown RBP21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 SPATS1Q496A3 300 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 E9PAM4 449 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 COPZ1P61923 177 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 ESRP1Q6NXG1 681 aaKnown RBP21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 NEK5Q6P3R8 708 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 PRR23BQ6ZRT6 265 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 PPP1R16AQ96I34 528 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 IPPKQ9H8X2 491 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 TIMM22Q9Y584 194 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 TEX264Q9Y6I9 313 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 TLR5O60602 858 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 TRBC1P01850 177 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 FOXM1Q08050 763 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 NOMO2Q5JPE7 1267 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 PIK3R3Q92569 461 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 U3KQV3 271 aa21.05■□□□□ 0.96
TGFBR1-202ENST00000374994 PIP5K1BO14986 540 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 THOP1P52888 689 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 ATP12AP54707 1039 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 SPPL2BQ8TCT7 592 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 TBATAQ96M53 351 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 TSSK3Q96PN8 268 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FCRL5Q96RD9 977 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 ST3GAL5Q9UNP4 418 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FAM234BA2RU67 622 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 DHFRP00374 187 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 DUSP28Q4G0W2 176 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 RBM48Q5RL73 367 aaKnown RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 PDSS2Q86YH6 399 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 DENND1CQ8IV53 801 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 MYO19Q96H55 970 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 TFB2MQ9H5Q4 396 aaKnown RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 ABCC6O95255 1503 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 IRF6O14896 467 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FAM189A1O60320 539 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 EML3Q32P44 896 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 UXS1Q8NBZ7 420 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 PCDHB9Q9Y5E1 797 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 LYVE1Q9Y5Y7 322 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 AIREO43918 545 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 CLDN9O95484 217 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 MAPKAPK2P49137 400 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FAM131AQ6UXB0 335 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 PIK3C3Q8NEB9 887 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 IPCEF1Q8WWN9 437 aaPredicted RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 BRD9Q9H8M2 597 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FBXW11Q9UKB1 542 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 CNOT6Q9ULM6 557 aaKnown RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 ZNF99A8MXY4 864 aaPredicted RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 C5orf22Q49AR2 442 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 KLHDC10Q6PID8 442 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 LBX2Q6XYB7 198 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FLCNQ8NFG4 579 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 OR5K1Q8NHB7 308 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 LRRC3Q9BY71 257 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 DGKBQ9Y6T7 804 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 GSAPA4D1B5 854 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 IMPDH1P20839 514 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 TLX1P31314 330 aaPredicted RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 HCAR3P49019 387 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 CLCN2P51788 898 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 PFKPQ01813 784 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 SCN1BQ07699 218 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 UBE2R2Q712K3 238 aaPredicted RBP21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 CAMKK1Q8N5S9 505 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 HTRA1Q92743 480 aa21.04■□□□□ 0.96
TGFBR1-202ENST00000374994 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
TGFBR1-202ENST00000374994 TYROBPO43914 113 aa21.03■□□□□ 0.96
TGFBR1-202ENST00000374994 PCDH8O95206 1070 aa21.03■□□□□ 0.96
TGFBR1-202ENST00000374994 IL1R2P27930 398 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms