RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CNOT1A5YKK6 2376 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3A-202ENST00000374837 DKK1O94907 266 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 CKMT1AP12532 417 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 FNTAP49354 379 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ACADVLP49748 655 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 VPS41P49754 854 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ETF1P62495 437 aaKnown RBP20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 TMPRSS15P98073 1019 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 DAB2P98082 770 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 XIAPP98170 497 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 SEPT6Q14141 434 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 CCDC157Q569K6 752 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 C6orf132Q5T0Z8 1188 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 CERCAMQ5T4B2 595 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ADGRG6Q86SQ4 1221 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 NRROSQ86YC3 692 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 PHYKPLQ8IUZ5 450 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ZNF398Q8TD17 642 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 OR2M4Q96R27 311 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 C19orf43Q9BQ61 176 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 OR2AG1Q9H205 316 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ZNHIT2Q9UHR6 403 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ANGPTL2Q9UKU9 493 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 GPR34Q9UPC5 381 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 PRKAB1Q9Y478 270 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ST14Q9Y5Y6 855 aa20.78■□□□□ 0.92
MAP1LC3A-202ENST00000374837 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 GPR39O43194 453 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 NUAK1O60285 661 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 MTX2O75431 263 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ZNF8P17098 575 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 ACP1P24666 158 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 AK4P27144 223 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 CTBSQ01459 385 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 GPS1Q13098 491 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 KHDC1Q4VXA5 237 aaKnown RBP20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 GALNT13Q8IUC8 556 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 FAM46DQ8NEK8 389 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 DNAJC1Q96KC8 554 aaKnown RBP20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 GSDMCQ9BYG8 508 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 RMI1Q9H9A7 625 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 APPL1Q9UKG1 709 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 PCDHGA1Q9Y5H4 931 aa20.77■□□□□ 0.92
MAP1LC3A-202ENST00000374837 TCRBV7S3A2A0A539 114 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 MROH6A6NGR9 719 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CCL22O00626 93 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 SRP72O76094 671 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TRIM16O95361 564 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 PRAMEF1O95521 474 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 GAS8O95995 478 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 PMLP29590 882 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CASQ1P31415 396 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 HADHAP40939 763 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TERF1P54274 439 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ILF3Q12906 894 aaKnown RBP eCLIP20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 FOXC1Q12948 553 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 PEX6Q13608 980 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ITGA9Q13797 1035 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CCDC38Q502W7 563 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 SLC35F3Q8IY50 421 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 GDAP1Q8TB36 358 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 GRK7Q8WTQ7 553 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 STYXQ8WUJ0 223 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ADAMTS14Q8WXS8 1223 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 DDX47Q9H0S4 455 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 NLE1Q9NVX2 485 aaPredicted RBP20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 SIRPGQ9P1W8 387 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 GULP1Q9UBP9 304 aa20.76■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TDRD6O60522 2096 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 GRID2O43424 1007 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TOP3BO95985 862 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TPSB2P20231 275 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 DUSP3P51452 185 aaPredicted RBP20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 NR0B2Q15466 257 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TPSAB1Q15661 275 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 OGFOD3Q6PK18 319 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 SYT10Q6XYQ8 523 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 MICALCLQ6ZW33 695 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CHCHD4Q8N4Q1 142 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 GLMNQ92990 594 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ASB8Q9H765 288 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 SPATS2LQ9NUQ6 558 aaKnown RBP20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TAAR2Q9P1P5 351 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 RNF14Q9UBS8 474 aa20.75■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ARID1BQ8NFD5 2236 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 COL5A1P20908 1838 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CCDC78A2IDD5 438 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CHUKO15111 745 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 VEGFDO43915 354 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 RFPL3O75679 317 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CDK14O94921 469 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ECEL1O95672 775 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 ADRA1DP25100 572 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 PSMA3P25788 255 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 PAFAH1B1P43034 410 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 MAGEA6P43360 314 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 CDK16Q00536 496 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 TMEM115Q12893 351 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 KCNJ11Q14654 390 aa20.74■□□□□ 0.91
MAP1LC3A-202ENST00000374837 LDLRAP1Q5SW96 308 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms