RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CASKO14936 926 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 SHOX2O60902 331 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 LYPLAL1Q5VWZ2 237 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 GK5Q6ZS86 529 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 RD3Q7Z3Z2 195 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 CMC1Q7Z7K0 106 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 RAB43Q86YS6 212 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 SIX2Q9NPC8 291 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 PLK4O00444 970 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 KPNA3O00505 521 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 MAPK8P45983 427 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 RAP1GAP2Q684P5 730 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 POTEHQ6S545 545 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC4A11Q8NBS3 891 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 LGMNQ99538 433 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 TDRD1Q9BXT4 1180 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 DNAJC28Q9NX36 388 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 ADGRE2Q9UHX3 823 aa12.23□□□□□ -0.45
NPLOC4-202ENST00000374747 FAM240BA0A1B0GVZ2 78 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC9A3R1O14745 358 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RPL4P36578 427 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RPTNQ6XPR3 784 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ARMCX6Q7L4S7 300 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 SPATA19Q7Z5L4 167 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 PIK3C3Q8NEB9 887 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 TRPV1Q8NER1 839 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ZNF607Q96SK3 696 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RHOJQ9H4E5 214 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 PCDHGA4Q9Y5G9 962 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 EME2A4GXA9 379 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 AP3D1O14617 1153 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 EOMESO95936 686 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 LAG3P18627 525 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 MSX2P35548 267 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 OLFML2AQ68BL7 652 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 MEIOBQ8N635 442 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ZNF655Q8N720 491 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 HM13Q8TCT9 377 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 COL26A1Q96A83 441 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 FBXL18Q96ME1 805 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 TRIT1Q9H3H1 467 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 APOBEC3GQ9HC16 384 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC27A5Q9Y2P5 690 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 POLR3HQ9Y535 204 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 LRRC14BA6NHZ5 514 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ARHGEF33A8MVX0 844 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 LSM1O15116 133 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RGS10O43665 173 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 HDCP19113 662 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC6A2P23975 617 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 LILRA4P59901 499 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 XKR6Q5GH73 641 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 C6orf52Q5T4I8 152 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 DSELQ8IZU8 1212 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC34A3Q8N130 599 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 FITM2Q8N6M3 262 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 STXBP5LQ9Y2K9 1186 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 MATN2O00339 956 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 MPSTP25325 297 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 CTNNB1P35222 781 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 FAUP35544 74 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 CTSKP43235 329 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 PTPN5P54829 565 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 IRGQQ8WZA9 623 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 CITED4Q96RK1 184 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ACBD6Q9BR61 282 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 RHOBTB2Q9BYZ6 727 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 ZDHHC6Q9H6R6 413 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 PCDH18Q9HCL0 1135 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 VWA7Q9Y334 891 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 LTBP4Q8N2S1 1624 aa12.22□□□□□ -0.45
NPLOC4-202ENST00000374747 STX16-NPEPL1H3BU86 382 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 STX16O14662 325 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 SEMA3DO95025 777 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 OR5F1O95221 314 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 S100A6P06703 90 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 ABL2P42684 1182 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC26A9Q7LBE3 791 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 PGAM4Q8N0Y7 254 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 CPSF7Q8N684 471 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 NPLOC4Q8TAT6 608 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 BTBD9Q96Q07 612 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 HNRNPABQ99729 332 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 SEMA3CQ99985 751 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 PFDN2Q9UHV9 154 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 ARL5CA6NH57 179 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 QSOX1O00391 747 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms