RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 KIAA1328Q86T90 577 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 FAM129CQ86XR2 697 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 CCDC50Q8IVM0 306 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 KATNAL2Q8IYT4 538 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 NDUFAF2Q8N183 169 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 TXLNBQ8N3L3 684 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 ACRBPQ8NEB7 543 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 PATE1Q8WXA2 126 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 KIAA1143Q96AT1 154 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 RBM41Q96IZ5 413 aaKnown RBP19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 FRMD8Q9BZ67 464 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 ZNF71Q9NQZ8 489 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 KCNK4Q9NYG8 393 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 SUFUQ9UMX1 484 aa19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 REXO2Q9Y3B8 237 aaKnown RBP19.06■□□□□ 0.64
TRAPPC3-204ENST00000373166 DOPEY2Q9Y3R5 2298 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 CLEC18AA5D8T8 446 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 RCCD1A6NED2 376 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 EFCAB7A8K855 629 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 BTNL10A8MVZ5 291 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 KCNK1O00180 336 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 EPHB1P54762 984 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 IFI35P80217 286 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 CTBSQ01459 385 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 TMEM71Q6P5X7 295 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 CLEC18BQ6UXF7 455 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 NPNTQ6UXI9 565 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 BZW1Q7L1Q6 419 aaKnown RBP19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 NRSN1Q8IZ57 195 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 NAGSQ8N159 534 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 CLEC18CQ8NCF0 446 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 OLFM3Q96PB7 478 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 TEFMQ96QE5 360 aaKnown RBP19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 EFHD1Q9BUP0 239 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 ZMYND15Q9H091 742 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 BRD8Q9H0E9 1235 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 GPN2Q9H9Y4 310 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 OCIAD1Q9NX40 245 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 PILRAQ9UKJ1 303 aa19.05■□□□□ 0.64
TRAPPC3-204ENST00000373166 NKX2-8O15522 239 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 ZRANB2O95218 330 aaKnown RBP eCLIP19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 JCHAINP01591 159 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 MAP4P27816 1152 aaKnown RBP19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 CSF2RBP32927 897 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 MARCKSL1P49006 195 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 GPLD1P80108 840 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 CNGA3Q16281 694 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 TAZQ16635 292 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 TFDP3Q5H9I0 405 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 KAZNQ674X7 775 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 ANKS6Q68DC2 871 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 TMEM139Q8IV31 216 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 RCOR2Q8IZ40 523 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 NLGN4XQ8N0W4 816 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 FAM26EQ8N5C1 309 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 NLGN4YQ8NFZ3 816 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 TDRD1Q9BXT4 1180 aaKnown RBP19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 MAN2B2Q9Y2E5 1009 aa19.04■□□□□ 0.64
TRAPPC3-204ENST00000373166 NPIPB15A6NHN6 443 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 CST8O60676 142 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 HEXIM1O94992 359 aaKnown RBP19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 PRKAR1AP10644 381 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 ADCY8P40145 1251 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 NR2C2P49116 596 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 PPM1FP49593 454 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 CDK3Q00526 305 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 ZBTB17Q13105 803 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 DENND2CQ68D51 928 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 EXD1Q8NHP7 514 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 ARRDC2Q8TBH0 407 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 APOBEC4Q8WW27 367 aaKnown RBP19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 PIH1D2Q8WWB5 315 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 SCRN2Q96FV2 425 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 AHCYL2Q96HN2 611 aaKnown RBP19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 MCCC1Q96RQ3 725 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 TMEM9Q9P0T7 183 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 SLC17A4Q9Y2C5 497 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 ST14Q9Y5Y6 855 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 SDK2Q58EX2 2172 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 TEX15Q9BXT5 2789 aa19.03■□□□□ 0.64
TRAPPC3-204ENST00000373166 hCG_1818297A0A087WSY0 165 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 GOLGA6CA6NDK9 693 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 GOLGA6BA6NDN3 693 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 PSMD11O00231 422 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 PJA2O43164 708 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 FZD6O60353 706 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 IVLP07476 585 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 PDHA1P08559 390 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 GOLGA6DP0CG33 693 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 CTPS1P17812 591 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 LHCGRP22888 699 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 CTNNA1P35221 906 aaKnown RBP19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 ACTR1BP42025 376 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 POLD2P49005 469 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 ACTR1AP61163 376 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 NIPAL4Q0D2K0 466 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 CDC20Q12834 499 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 SEPT6Q14141 434 aa19.02■□□□□ 0.64
TRAPPC3-204ENST00000373166 RAET1GQ6H3X3 334 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms