RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 KCNC4Q03721 635 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 CCL14Q16627 93 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 BHLHA9Q7RTU4 235 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 TBC1D21Q8IYX1 336 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 RAB2BQ8WUD1 216 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 PABPC5Q96DU9 382 aaKnown RBP14.73□□□□□ -0.05
COL9A2-202ENST00000372748 L3HYPDHQ96EM0 354 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 TSPAN17Q96FV3 270 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 CORO1BQ9BR76 489 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 PCDH12Q9NPG4 1184 aa14.73□□□□□ -0.05
COL9A2-202ENST00000372748 SEMA4BQ9NPR2 832 aaPredicted RBP14.73□□□□□ -0.05
COL9A2-202ENST00000372748 MAN1A2O60476 641 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 LBPP18428 481 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 CCNCP24863 283 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 IST1P53990 364 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 RAD23AP54725 363 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 TIGD2Q4W5G0 525 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 STK32CQ86UX6 486 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 CILP2Q8IUL8 1156 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 TSGA13Q96PP4 275 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 PALMDQ9NP74 551 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 SLC52A3Q9NQ40 469 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 POLR3BQ9NW08 1133 aaPredicted RBP14.72□□□□□ -0.05
COL9A2-202ENST00000372748 CPA4Q9UI42 421 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 RBMX2Q9Y388 322 aaKnown RBP14.72□□□□□ -0.05
COL9A2-202ENST00000372748 KCTD3Q9Y597 815 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 C17orf102A2RUQ5 167 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 HRH2P25021 359 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 SCNN1GP51170 649 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 OR4D2P58180 307 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 PLIN5Q00G26 463 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 ITKQ08881 620 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 RAB41Q5JT25 222 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 KIAA0408Q6ZU52 694 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 OR13J1Q8NGT2 312 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 SCAMP5Q8TAC9 235 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 MYLPFQ96A32 169 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 IL12RB2Q99665 862 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 PCDHGA11Q9Y5H2 935 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 CPQQ9Y646 472 aa14.72□□□□□ -0.05
COL9A2-202ENST00000372748 GSTT2P0CG29 244 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 GSTT2BP0CG30 244 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 ARSFP54793 590 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 KCNK10P57789 538 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 UFM1P61960 85 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 OR4D1Q15615 310 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 GTF2IRD2BQ6EKJ0 949 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PM20D1Q6GTS8 502 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 GTF2IRD2Q86UP8 949 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 NRBF2Q96F24 287 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PTPN18Q99952 460 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 BDH2Q9BUT1 245 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 FUNDC2Q9BWH2 189 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 NTN4Q9HB63 628 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 RGS18Q9NS28 235 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 A0A1W2PP18 115 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 AXIN1O15169 862 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 BCAS1O75363 584 aaPredicted RBP14.71□□□□□ -0.05
COL9A2-202ENST00000372748 THP07101 528 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 LHX1P48742 406 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PPP1R8Q12972 351 aaKnown RBP14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PTPRCAPQ14761 206 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PLA2G4EQ3MJ16 856 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TIGD5Q53EQ6 642 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 ANKRD34AQ69YU3 496 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 CRTC3Q6UUV7 619 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 SPARTQ8N0X7 666 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 DCBLD1Q8N8Z6 715 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PNPT1Q8TCS8 783 aaKnown RBP14.71□□□□□ -0.05
COL9A2-202ENST00000372748 SLC22A17Q8WUG5 538 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 PTCD2Q8WV60 388 aaKnown RBP14.71□□□□□ -0.05
COL9A2-202ENST00000372748 NUDT8Q8WV74 236 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TMBIM1Q969X1 311 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 ALPK1Q96QP1 1244 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TMEM209Q96SK2 561 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TDRD1Q9BXT4 1180 aaKnown RBP14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TRIM54Q9BYV2 358 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 MPP6Q9NZW5 540 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TSC22D4Q9Y3Q8 395 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 TTC3P53804 2025 aa14.71□□□□□ -0.05
COL9A2-202ENST00000372748 MATN3O15232 486 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 MSI1O43347 362 aaKnown RBP14.71□□□□□ -0.06
COL9A2-202ENST00000372748 ABCB7O75027 752 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 CRCPO75575 148 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 CRHBPP24387 322 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 DNASE1L3Q13609 305 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 MEP1AQ16819 746 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 ZNF362Q5T0B9 420 aaPredicted RBP14.71□□□□□ -0.06
COL9A2-202ENST00000372748 HS3ST5Q8IZT8 346 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 GOLM1Q8NBJ4 401 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 PDPRQ8NCN5 879 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 CALML6Q8TD86 181 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 OSCP1Q8WVF1 389 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 SH3YL1Q96HL8 342 aaPredicted RBP14.71□□□□□ -0.06
COL9A2-202ENST00000372748 MRM3Q9HC36 420 aaKnown RBP14.71□□□□□ -0.06
COL9A2-202ENST00000372748 TMLHEQ9NVH6 421 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 FAM32AQ9Y421 112 aaKnown RBP14.71□□□□□ -0.06
COL9A2-202ENST00000372748 PCDHGA8Q9Y5G5 932 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 GPR45Q9Y5Y3 372 aa14.71□□□□□ -0.06
COL9A2-202ENST00000372748 C1RP00736 705 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms