RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 ETNK1Q9HBU6 452 aa9.54□□□□□ -0.88
TMEM254-201ENST00000372273 CAPN10Q9HC96 672 aa9.54□□□□□ -0.88
TMEM254-201ENST00000372273 KLC4Q9NSK0 619 aa9.54□□□□□ -0.88
TMEM254-201ENST00000372273 PNMA8BQ9ULN7 279 aaPredicted RBP9.54□□□□□ -0.88
TMEM254-201ENST00000372273 SPO11Q9Y5K1 396 aa9.54□□□□□ -0.88
TMEM254-201ENST00000372273 A0A0J9YYE9 177 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 AP1G1O43747 822 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
TMEM254-201ENST00000372273 GCATO75600 419 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 TM7SF2O76062 418 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 TRBC1P01850 177 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 TPSB2P20231 275 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 GRIA1P42261 906 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 MAGEA6P43360 314 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 CCR5P51681 352 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 POLR2LP62875 67 aaKnown RBP9.53□□□□□ -0.88
TMEM254-201ENST00000372273 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
TMEM254-201ENST00000372273 GRIK2Q13002 908 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 CBLBQ13191 982 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 INPP5AQ14642 412 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 SETDB1Q15047 1291 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 ACOX1Q15067 660 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 TPSAB1Q15661 275 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 CSRP2Q16527 193 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 KBTBD12Q3ZCT8 623 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 KDELC1Q6UW63 502 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 GCNT7Q6ZNI0 430 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 LYSMD3Q7Z3D4 306 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 CTAGE3PQ8IX95 158 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
TMEM254-201ENST00000372273 SLC44A1Q8WWI5 657 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 RAB7BQ96AH8 199 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 SPATA13Q96N96 652 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 IQCGQ9H095 443 aaKnown RBP9.53□□□□□ -0.88
TMEM254-201ENST00000372273 GBA3Q9H227 469 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 BPIFA1Q9NP55 256 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 VPS45Q9NRW7 570 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 ZC3H7BQ9UGR2 993 aaKnown RBP9.53□□□□□ -0.88
TMEM254-201ENST00000372273 ANKRD6Q9Y2G4 727 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 PCDHGA5Q9Y5G8 931 aa9.53□□□□□ -0.88
TMEM254-201ENST00000372273 C1orf232A0A0U1RR37 186 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 A0A1B0GTW7 788 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 A0A1W2PR77 199 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 GPR39O43194 453 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 AVILO75366 819 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 RASSF9O75901 435 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 KRT37O76014 449 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 UBOX5O94941 541 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 PCCBP05166 539 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 ATXN1LP0C7T5 689 aaKnown RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 GNSP15586 552 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 TPH1P17752 444 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 CD38P28907 300 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 ALDH3A1P30838 453 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 FDFT1P37268 417 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 CCDC15Q0P6D6 951 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 ELP6Q0PNE2 266 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 IRF4Q15306 451 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 SLC1A5Q15758 541 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 DUOXA1Q1HG43 343 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 UAP1L1Q3KQV9 507 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 AASDHQ4L235 1098 aaPredicted RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 SETMARQ53H47 684 aaPredicted RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 SIRPB2Q5JXA9 342 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 PEAR1Q5VY43 1037 aaPredicted RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 SLC23A3Q6PIS1 610 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 Q6ZSR6 202 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 SLC26A11Q86WA9 606 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 IGDCC3Q8IVU1 814 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 TCP10LQ8TDR4 215 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 IFT43Q96FT9 208 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 LENG8Q96PV6 779 aaPredicted RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 FCRL5Q96RD9 977 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 AGAP2Q99490 1192 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 FICDQ9BVA6 458 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 LGR4Q9BXB1 951 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 XAB2Q9HCS7 855 aaKnown RBP9.52□□□□□ -0.88
TMEM254-201ENST00000372273 USH1CQ9Y6N9 552 aa9.52□□□□□ -0.88
TMEM254-201ENST00000372273 CCDC78A2IDD5 438 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 C4orf47A7E2U8 309 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 PRAMEF26H0Y7S4 382 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 GOLGA8RI6L899 631 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 ARHGAP33O14559 1287 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 MTSS1O43312 755 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 EDF1O60869 148 aaKnown RBP9.52□□□□□ -0.89
TMEM254-201ENST00000372273 SDC3O75056 442 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 PIAS1O75925 651 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 DCTN3O75935 186 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 TROVE2P10155 538 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMEM254-201ENST00000372273 NEFHP12036 1026 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 HNRNPA2B1P22626 353 aaKnown RBP9.52□□□□□ -0.89
TMEM254-201ENST00000372273 IGFALSP35858 605 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 CDKN3Q16667 212 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 HLA-BQ31612 363 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 TMEM52BQ4KMG9 183 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 KIAA1161Q6NSJ0 714 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 CGB2Q6NT52 195 aa9.52□□□□□ -0.89
TMEM254-201ENST00000372273 NEK5Q6P3R8 708 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms