RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 PRKCQQ04759 706 aa18.33■□□□□ 0.53
VEGFA-206ENST00000372077 HSF5Q4G112 596 aaPredicted RBP18.33■□□□□ 0.53
VEGFA-206ENST00000372077 LRRC73Q5JTD7 316 aa18.33■□□□□ 0.53
VEGFA-206ENST00000372077 DPPA4Q7L190 304 aa18.33■□□□□ 0.53
VEGFA-206ENST00000372077 PTAR1Q7Z6K3 402 aaPredicted RBP18.33■□□□□ 0.53
VEGFA-206ENST00000372077 CBARPQ8N350 705 aaPredicted RBP18.33■□□□□ 0.53
VEGFA-206ENST00000372077 OR4L1Q8NH43 312 aa18.33■□□□□ 0.53
VEGFA-206ENST00000372077 FKBPLQ9UIM3 349 aa18.33■□□□□ 0.53
VEGFA-206ENST00000372077 PRUNE2Q8WUY3 3088 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 A8MX80 341 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 BAG2O95816 211 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF30P17039 623 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 CNTFP26441 200 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 PTPN4P29074 926 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 COPAP53621 1224 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 XIAPP98170 497 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 SEMG2Q02383 582 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 LGSNQ5TDP6 509 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 AFTPHQ6ULP2 937 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 KIAA0408Q6ZU52 694 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 STRA8Q7Z7C7 330 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 DENND6AQ8IWF6 608 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 TXNDC5Q8NBS9 432 aaKnown RBP18.33■□□□□ 0.52
VEGFA-206ENST00000372077 OR2T3Q8NH03 318 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 GABPB2Q8TAK5 448 aaPredicted RBP18.33■□□□□ 0.52
VEGFA-206ENST00000372077 APOPT1Q96IL0 206 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 HDAC8Q9BY41 377 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 FBRSQ9HAH7 460 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 SENP1Q9P0U3 644 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 SCN8AQ9UQD0 1980 aa18.33■□□□□ 0.52
VEGFA-206ENST00000372077 A0A1W2PQF6 199 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 HMX2A2RU54 273 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 ITM2AO43736 263 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 C7P10643 843 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 CD72P21854 359 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 XPAP23025 273 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-206ENST00000372077 RALGDSQ12967 914 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 KIAA1211LQ6NV74 962 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 GALNT7Q86SF2 657 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 NUDCD3Q8IVD9 361 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF687Q8N1G0 1237 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 NRG4Q8WWG1 115 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 CCDC124Q96CT7 223 aaKnown RBP18.32■□□□□ 0.52
VEGFA-206ENST00000372077 RBBP8Q99708 897 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 FBXO5Q9UKT4 447 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 KRT38O76015 456 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 SNRPAP09012 282 aaKnown RBP18.32■□□□□ 0.52
VEGFA-206ENST00000372077 C1SP09871 688 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 GABRB3P28472 473 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 SLC1A2P43004 574 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 PSMD8P48556 350 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 STC1P52823 247 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 PTPN5P54829 565 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 CTBP1Q13363 440 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 FAM219BQ5XKK7 198 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF852Q6ZMS4 543 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 TTC1Q99614 292 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 THTPAQ9BU02 230 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 MARCH4Q9P2E8 410 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-206ENST00000372077 TXNDC16Q9P2K2 825 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 WNT16Q9UBV4 365 aa18.32■□□□□ 0.52
VEGFA-206ENST00000372077 CD3EAPO15446 510 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 GSC2O15499 205 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 SPINT1O43278 529 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 RNASEH1O60930 286 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 KRT37O76014 449 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 AHSGP02765 367 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 CD1EP15812 388 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 MMP12P39900 470 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ETV4P43268 484 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 STARD3Q14849 445 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 CST6Q15828 149 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF470Q6ECI4 717 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ERAP2Q6P179 960 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ERN2Q76MJ5 926 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 CILP2Q8IUL8 1156 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.31■□□□□ 0.523e-7■■□□□ 13.2
VEGFA-206ENST00000372077 LOC100653049A0A140TA62 436 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 AREL1O15033 823 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 KRT34O76011 436 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ADH1BP00325 375 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ADRB3P13945 408 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 HOXB2P14652 356 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 BPIP17213 487 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 COL9A1P20849 921 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 RASSF2P50749 326 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 NEK3P51956 506 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 RPS14P62263 151 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 IRX1P78414 480 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 FBXL19Q6PCT2 694 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 SCG3Q8WXD2 468 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 PBXIP1Q96AQ6 731 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 MTBPQ96DY7 904 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ERLEC1Q96DZ1 483 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 DYRK4Q9NR20 520 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 CATSPERZQ9NTU4 200 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 CA14Q9ULX7 337 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 GAPDHSO14556 408 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 OGNP20774 298 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 MC4RP32245 332 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms