RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 GBA3Q9H227 469 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CCDC68Q9H2F9 335 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 MEAF6Q9HAF1 191 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 EML4Q9HC35 981 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ZFP14Q9HCL3 533 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 TDP1Q9NUW8 608 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 DUS2Q9NX74 493 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 CACNA2D2Q9NY47 1150 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 KLHL8Q9P2G9 620 aaPredicted RBP11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 DNMT3LQ9UJW3 386 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 ACOT9Q9Y305 439 aa11.42□□□□□ -0.58
TSPAN1-201ENST00000372003 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 hCG_2014768A0A024R1R8 64 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SYNJ2BP-COX16A0A087WUM0 186 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 E7ENX8 843 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SCAMP3O14828 347 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 DCLK1O15075 740 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 AKAP10O43572 662 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 DLX3O60479 287 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 ASGR2P07307 311 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SNRPB2P08579 225 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 IRF1P10914 325 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 TFE3P19532 575 aaPredicted RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 ZXDBP98169 803 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 MPP1Q00013 466 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF33AQ06730 810 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 ILF2Q12905 390 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 CBX3Q13185 183 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 GRM3Q14832 879 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 NRF1Q16656 503 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 REP15Q6BDI9 236 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 NAPEPLDQ6IQ20 393 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 FSTL5Q8N475 847 aaPredicted RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 OR2T34Q8NGX1 318 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 OR2T3Q8NH03 318 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SLCO4A1Q96BD0 722 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 RSPRY1Q96DX4 576 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC45A3Q96JT2 553 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SCYL1Q96KG9 808 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 CDK5RAP1Q96SZ6 601 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 AGAP2Q99490 1192 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 MRPL57Q9BQC6 102 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 PLA2G2FQ9BZM2 168 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 MRPL46Q9H2W6 279 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 MUC13Q9H3R2 512 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 CCM2LQ9NUG4 571 aaPredicted RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 COX16Q9P0S2 106 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 ZMYM5Q9UJ78 669 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 CROTQ9UKG9 612 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC39A10Q9ULF5 831 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 CNOT6Q9ULM6 557 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 STAP1Q9ULZ2 295 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 RUVBL2Q9Y230 463 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
TSPAN1-201ENST00000372003 MYOCOSA0A1B0GUC4 107 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SOBPA7XYQ1 873 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 HEPACAM2A8MVW5 462 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 STX16-NPEPL1H3BU86 382 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 TK2O00142 265 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PSMD12O00232 456 aaPredicted RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 MSI1O43347 362 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SRP72O76094 671 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 ESRRBO95718 433 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 OLFM2O95897 454 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC35E2BP0CK96 405 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 FCGR1AP12314 374 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 FCARP24071 287 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 ATP5F1P24539 256 aaPredicted RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 DCKP27707 260 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 NOS2P35228 1153 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PSMD7P51665 324 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 RAB10P61026 200 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PITX1P78337 314 aaPredicted RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC7A9P82251 487 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 GRSF1Q12849 480 aaKnown RBP eCLIP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 CDH17Q12864 832 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 BNIP2Q12982 314 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 FASTKQ14296 549 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PRPSAP1Q14558 356 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 USP10Q14694 798 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 DLG2Q15700 870 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 HMBOX1Q6NT76 420 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PAOXQ6QHF9 649 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 DHFR2Q86XF0 187 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 CELF5Q8N6W0 485 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 DNAAF3Q8N9W5 541 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PCYOX1LQ8NBM8 494 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PDPRQ8NCN5 879 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 CCNYQ8ND76 341 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 AGR3Q8TD06 166 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 SH3RF2Q8TEC5 729 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 PTCD2Q8WV60 388 aaKnown RBP11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 NTAN1Q96AB6 310 aa11.4□□□□□ -0.58
TSPAN1-201ENST00000372003 TMIGD2Q96BF3 282 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms