RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ANKRD49Q8WVL7 239 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 DNASE1L2Q92874 299 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 XPR1Q9UBH6 696 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 GNPTGQ9UJJ9 305 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 MED16Q9Y2X0 877 aa26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 OAS3Q9Y6K5 1087 aaKnown RBP26.1■■□□□ 1.77
ATPAF1-202ENST00000371937 E5RI56 91 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 H3BMM5 538 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 TK2O00142 265 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 EBAG9O00559 213 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 KIR2DL1P43626 348 aaPredicted RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 ITIH4Q14624 930 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 LIPIQ6XZB0 460 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 RFLNAQ6ZTI6 216 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 KCNV2Q8TDN2 545 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 PHF7Q9BWX1 381 aaPredicted RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 ANTXRLA6NF34 631 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 TARM1B6A8C7 271 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 RNASEH1O60930 286 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 SERPINE1P05121 402 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 RALBP11234 206 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 FGF3P11487 239 aaPredicted RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 ADRB3P13945 408 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 CHRM3P20309 590 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 METAP1P53582 386 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 PRKAA2P54646 552 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 CAMK2GQ13555 558 aaPredicted RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 ATP13A5Q4VNC0 1218 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 ERN2Q76MJ5 926 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 C7orf26Q96N11 449 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 GPR21Q99679 349 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 SPATA16Q9BXB7 569 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 HDAC8Q9BY41 377 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 OXSMQ9NWU1 459 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 ZDHHC3Q9NYG2 299 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 TRMT6Q9UJA5 497 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 PIAS3Q9Y6X2 628 aa26.09■■□□□ 1.77
ATPAF1-202ENST00000371937 SYNCRIPO60506 623 aaKnown RBP26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 H2AFYO75367 372 aaKnown RBP26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 PTRHD1Q6GMV3 140 aaKnown RBP26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 TXNDC11Q6PKC3 985 aa26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 Q6ZVL8 140 aa26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 RAB7BQ96AH8 199 aa26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 THAP1Q9NVV9 213 aa26.08■■□□□ 1.77
ATPAF1-202ENST00000371937 AREL1O15033 823 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 TRIM13O60858 407 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 NIPSNAP2O75323 286 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SBK3P0C264 359 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 TIE1P35590 1138 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 ETV3P41162 512 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 NSG1P42857 185 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 PSMD8P48556 350 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SEC13P55735 322 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 TECRLQ5HYJ1 363 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SDE2Q6IQ49 451 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 CGB2Q6NT52 195 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 PAQR3Q6TCH7 311 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 TECPR1Q7Z6L1 1165 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 NRSN1Q8IZ57 195 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 NKAPQ8N5F7 415 aaKnown RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 FAM136AQ96C01 138 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 COPS8Q99627 209 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 CD84Q9UIB8 345 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SNNO75324 88 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 TROVE2P10155 538 aaKnown RBP eCLIP26.07■■□□□ 1.764e-8■■■■■ 72
ATPAF1-202ENST00000371937 CA5AP35218 305 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 WASP42768 502 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 ASPHQ12797 758 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SETMARQ53H47 684 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 ZCCHC23Q6ZST2 131 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SPATS2Q86XZ4 545 aaKnown RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 EZH1Q92800 747 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 ZSCAN5AQ9BUG6 496 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 BOCQ9BWV1 1114 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 UNKQ9C0B0 810 aaKnown RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 RSPH9Q9H1X1 276 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 SMOXQ9NWM0 555 aa26.07■■□□□ 1.76
ATPAF1-202ENST00000371937 TGDSO95455 350 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 CD1DP15813 335 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 LIG3P49916 1009 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 ACOX1Q15067 660 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 ZNF284Q2VY69 593 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 TRAM1L1Q8N609 369 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 HEBP1Q9NRV9 189 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 ITM2BQ9Y287 266 aa26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 SPTBN5Q9NRC6 3674 aaKnown RBP26.06■■□□□ 1.76
ATPAF1-202ENST00000371937 NEMP1O14524 444 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 WNT9AO14904 365 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 TFEBP19484 476 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 DRD1P21728 446 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 NTSR1P30989 418 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 OCRLQ01968 901 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 GRSF1Q12849 480 aaKnown RBP eCLIP26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 TMEM196Q5HYL7 178 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 HENMT1Q5T8I9 393 aaKnown RBP26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 LIPMQ5VYY2 423 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 FOXR1Q6PIV2 292 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 MACC1Q6ZN28 852 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 SCAMP4Q969E2 229 aa26.05■■□□□ 1.76
ATPAF1-202ENST00000371937 CCDC126Q96EE4 140 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms