RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CLCC1Q96S66 551 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 PLGRKTQ9HBL7 147 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 POLE3Q9NRF9 147 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 TMCO1Q9UM00 188 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 SNAPC1Q16533 368 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 BEND5Q7L4P6 421 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
SNX27-202ENST00000368841 SLC39A8Q9C0K1 460 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 LRRC72A6NJI9 287 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 KCNU1A8MYU2 1149 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 hCG_2039718K7EN88 272 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 HAT1O14929 419 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 RGS20O76081 388 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 MATKP42679 507 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 FLT3LGP49771 235 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 ACLYP53396 1101 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 GTF2BQ00403 316 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 RIPK1Q13546 671 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 ANXA8L1Q5VT79 327 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 DLG3Q92796 817 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 KCNE2Q9Y6J6 123 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 A8MUA0 341 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 ZNF879B4DU55 563 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 SLC31A1O15431 190 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 SEPHS1P49903 392 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 NOMO3P69849 1222 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 CREMQ03060 361 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 TIMM50Q3ZCQ8 353 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 RNASEH2BQ5TBB1 312 aaKnown RBP18.07■□□□□ 0.48
SNX27-202ENST00000368841 TMPRSS9Q7Z410 1059 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 APLFQ8IW19 511 aaPredicted RBP18.07■□□□□ 0.48
SNX27-202ENST00000368841 FAM71AQ8IYT1 594 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 HMCESQ96FZ2 354 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 C1QTNF1Q9BXJ1 281 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 GSDMCQ9BYG8 508 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 TOR3AQ9H497 397 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 PRKAR1AP10644 381 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 CDH5P33151 784 aaPredicted RBP18.07■□□□□ 0.48
SNX27-202ENST00000368841 NAE1Q13564 534 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 FGFBP2Q9BYJ0 223 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 FAM192AQ9GZU8 254 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 ARL8BQ9NVJ2 186 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 TRAF6Q9Y4K3 522 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 PMF1-BGLAPU3KQ54 211 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 A0A0G2JN53 185 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 RPS6KA3P51812 740 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 SMCO1Q147U7 214 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 DEPDC4Q8N2C3 294 aa18.07■□□□□ 0.48
SNX27-202ENST00000368841 DUS2Q9NX74 493 aaKnown RBP18.07■□□□□ 0.48
SNX27-202ENST00000368841 GCATO75600 419 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 BCAP31P51572 246 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 ADAMTSL2Q86TH1 951 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 SLCO6A1Q86UG4 719 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 LRRC17Q8N6Y2 441 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 SHC3Q92529 594 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 ESAMQ96AP7 390 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 QSOX1O00391 747 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 CD48P09326 243 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 AHCYP23526 432 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 FCHO2Q0JRZ9 810 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 NEK5Q6P3R8 708 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 ZNF398Q8TD17 642 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 GPR21Q99679 349 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 C3orf18Q9UK00 162 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 VWA7Q9Y334 891 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 H3BM21 787 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 C22orf31O95567 290 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 PRKCHP24723 683 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 SLC5A3P53794 718 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 TMEM63BQ5T3F8 832 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 CHRAC1Q9NRG0 131 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 ATXN7L2Q5T6C5 722 aaPredicted RBP18.06■□□□□ 0.48
SNX27-202ENST00000368841 CERS5Q8N5B7 392 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 PRELID2Q8N945 189 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 C3orf14Q9HBI5 128 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 ATG13O75143 517 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 CDH3P22223 829 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 GABRB2P47870 512 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 KLF1Q13351 362 aaPredicted RBP18.06■□□□□ 0.48
SNX27-202ENST00000368841 TXNDC11Q6PKC3 985 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 TDRD1Q9BXT4 1180 aaKnown RBP18.06■□□□□ 0.48
SNX27-202ENST00000368841 MALT1Q9UDY8 824 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 POLR2JP52435 117 aaKnown RBP18.06■□□□□ 0.48
SNX27-202ENST00000368841 KCTD8Q6ZWB6 473 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 VSIG10LQ86VR7 867 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 MBD2Q9UBB5 411 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 AP4B1Q9Y6B7 739 aa18.06■□□□□ 0.48
SNX27-202ENST00000368841 H3BNH8 94 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 DNASE1L1P49184 302 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 NT5DC1Q5TFE4 455 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 SLC8B1Q6J4K2 584 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 CAPN13Q6MZZ7 669 aaPredicted RBP18.05■□□□□ 0.48
SNX27-202ENST00000368841 PRSS55Q6UWB4 352 aaPredicted RBP18.05■□□□□ 0.48
SNX27-202ENST00000368841 ZNF670Q9BS34 389 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 YIPF4Q9BSR8 244 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 PCDH18Q9HCL0 1135 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 FBXO5Q9UKT4 447 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.05■□□□□ 0.48
SNX27-202ENST00000368841 DDX3YO15523 660 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms