RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 PAFAH1B3Q15102 231 aaKnown RBP10.25□□□□□ -0.77
CLRN3-201ENST00000368671 IFI16Q16666 785 aaKnown RBP10.25□□□□□ -0.77
CLRN3-201ENST00000368671 ATP13A4Q4VNC1 1196 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.25□□□□□ -0.77
CLRN3-201ENST00000368671 HGSNATQ68CP4 663 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 NLRP8Q86W28 1048 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 CPNE8Q86YQ8 564 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 LRRC49Q8IUZ0 686 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 BMPERQ8N8U9 685 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 NCSTNQ92542 709 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 WDR24Q96S15 920 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 ASPSCR1Q9BZE9 553 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 PCDH9Q9HC56 1237 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 HAUS2Q9NVX0 235 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 TBC1D29Q9UFV1 150 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 KLHL3Q9UH77 587 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 ATMQ13315 3056 aa10.25□□□□□ -0.77
CLRN3-201ENST00000368671 A0A087X0T9 212 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 FAM187AA6NFU0 413 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ZNF891A8MT65 544 aaPredicted RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 FADS2P1A8MWK0 482 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 PRLP01236 227 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 SERPING1P05155 500 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CYP1A2P05177 515 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 FAM228BP0C875 321 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 PRKAR1AP10644 381 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CES1P23141 567 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CCNCP24863 283 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CCR10P46092 362 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ARSEP51690 589 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 KCNAB2Q13303 367 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 NR1I3Q14994 352 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ANKRD20A8PQ5CZ79 823 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 FIGNQ5HY92 759 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ZFYVE27Q5T4F4 411 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ALG1LQ6GMV1 187 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 SLC9B2Q86UD5 537 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 NLGN4XQ8N0W4 816 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 KCTD6Q8NC69 237 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CCNYQ8ND76 341 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ARMC2Q8NEN0 867 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 NLGN4YQ8NFZ3 816 aaPredicted RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ARRDC2Q8TBH0 407 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ZNF564Q8TBZ8 553 aaPredicted RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 FAM71BQ8TC56 605 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CPLX3Q8WVH0 158 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 KIAA1143Q96AT1 154 aaPredicted RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 SH3KBP1Q96B97 665 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 RTP4Q96DX8 246 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 RNF31Q96EP0 1072 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 TEFMQ96QE5 360 aaKnown RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 TBC1D10AQ9BXI6 508 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ADNPQ9H2P0 1102 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 FAM83DQ9H4H8 585 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 GPN2Q9H9Y4 310 aaPredicted RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 APMAPQ9HDC9 416 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ARFGAP3Q9NP61 516 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 PKD2L2Q9NZM6 624 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 VPS18Q9P253 973 aa10.24□□□□□ -0.77
CLRN3-201ENST00000368671 CNOT6Q9ULM6 557 aaKnown RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 BZW2Q9Y6E2 419 aaKnown RBP10.24□□□□□ -0.77
CLRN3-201ENST00000368671 ZNF106Q9H2Y7 1883 aaKnown RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 COL6A6A6NMZ7 2263 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 LOC101059948A0A1B0GTJ6 334 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 A0A1W2PQJ5 194 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 NKX2-8O15522 239 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 GRID2O43424 1007 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 SLC4A1P02730 911 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 SLC2A4P14672 509 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 MAN1A1P33908 653 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 CD86P42081 329 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 SPINT3P49223 89 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 TAS2R40P59535 323 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 MC2RQ01718 297 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 GBE1Q04446 702 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 TLE1Q04724 770 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 GALNT3Q14435 633 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 PLA2G4EQ3MJ16 856 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 FAM182AQ5T1J6 154 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 ZNF648Q5T619 568 aaPredicted RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 HENMT1Q5T8I9 393 aaKnown RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 CAVIN1Q6NZI2 390 aaKnown RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 IYDQ6PHW0 289 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 WDR74Q6RFH5 385 aaPredicted RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 CEACAM20Q6UY09 585 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 LYSMD3Q7Z3D4 306 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 TIPARPQ7Z3E1 657 aaKnown RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 ARHGAP22Q7Z5H3 698 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 CCDC13Q8IYE1 715 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 UNC5BQ8IZJ1 945 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 CCHCR1Q8TD31 782 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 TSGA13Q96PP4 275 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 ZNF670Q9BS34 389 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 HERPUD2Q9BSE4 406 aa10.23□□□□□ -0.77
CLRN3-201ENST00000368671 MLPHQ9BV36 600 aaPredicted RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.23□□□□□ -0.77
CLRN3-201ENST00000368671 OSGEPL1Q9H4B0 414 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms