RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 GPX6P59796 221 aa8.8□□□□□ -1
TPM3-213ENST00000368545 AASDHQ4L235 1098 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 TNFAIP8L3Q5GJ75 292 aa8.8□□□□□ -1
TPM3-213ENST00000368545 KCTD11Q693B1 232 aa8.8□□□□□ -1
TPM3-213ENST00000368545 TXNDC8Q6A555 127 aa8.8□□□□□ -1
TPM3-213ENST00000368545 RFWD3Q6PCD5 774 aa8.8□□□□□ -1
TPM3-213ENST00000368545 KDM7AQ6ZMT4 941 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZNF354CQ86Y25 554 aa8.8□□□□□ -1
TPM3-213ENST00000368545 FAM217AQ8IXS0 508 aa8.8□□□□□ -1
TPM3-213ENST00000368545 SH2D3CQ8N5H7 860 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ARL14EPQ8N8R7 260 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 PRICKLE1Q96MT3 831 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 ZNF599Q96NL3 588 aa8.8□□□□□ -1
TPM3-213ENST00000368545 EBNA1BP2Q99848 306 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 JAM3Q9BX67 310 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZMAT4Q9H898 229 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZDHHC7Q9NXF8 308 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZC3H7BQ9UGR2 993 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 HCFC2Q9Y5Z7 792 aa8.8□□□□□ -1
TPM3-213ENST00000368545 CPQQ9Y646 472 aa8.8□□□□□ -1
TPM3-213ENST00000368545 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 SDR42E2A6NKP2 422 aa8.8□□□□□ -1
TPM3-213ENST00000368545 TRDMT1O14717 391 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 CCL16O15467 120 aa8.8□□□□□ -1
TPM3-213ENST00000368545 OIP5O43482 229 aa8.8□□□□□ -1
TPM3-213ENST00000368545 AVILO75366 819 aa8.8□□□□□ -1
TPM3-213ENST00000368545 PTPN2P17706 415 aa8.8□□□□□ -1
TPM3-213ENST00000368545 SSTR1P30872 391 aa8.8□□□□□ -1
TPM3-213ENST00000368545 HOXA6P31267 233 aa8.8□□□□□ -1
TPM3-213ENST00000368545 GEMP55040 296 aa8.8□□□□□ -1
TPM3-213ENST00000368545 GEMIN4P57678 1058 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 MAGOHP61326 146 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 CYP4F8P98187 520 aa8.8□□□□□ -1
TPM3-213ENST00000368545 SRSF2Q01130 221 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 ZNF177Q13360 481 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 ARHGAP15Q53QZ3 475 aa8.8□□□□□ -1
TPM3-213ENST00000368545 MARC1Q5VT66 337 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZNF783Q6ZMS7 281 aa8.8□□□□□ -1
TPM3-213ENST00000368545 Q6ZNB5 142 aa8.8□□□□□ -1
TPM3-213ENST00000368545 CIR1Q86X95 450 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 BBS5Q8N3I7 341 aa8.8□□□□□ -1
TPM3-213ENST00000368545 SLC44A3Q8N4M1 653 aa8.8□□□□□ -1
TPM3-213ENST00000368545 ZNF655Q8N720 491 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 MAB21L3Q8N8X9 362 aa8.8□□□□□ -1
TPM3-213ENST00000368545 HJURPQ8NCD3 748 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 SLC22A17Q8WUG5 538 aa8.8□□□□□ -1
TPM3-213ENST00000368545 FBLIM1Q8WUP2 373 aa8.8□□□□□ -1
TPM3-213ENST00000368545 TCTN2Q96GX1 697 aa8.8□□□□□ -1
TPM3-213ENST00000368545 SIGLEC10Q96LC7 697 aa8.8□□□□□ -1
TPM3-213ENST00000368545 UBL7Q96S82 380 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 CYTH2Q99418 400 aa8.8□□□□□ -1
TPM3-213ENST00000368545 GORASP1Q9BQQ3 440 aa8.8□□□□□ -1
TPM3-213ENST00000368545 CNOT10Q9H9A5 744 aaKnown RBP8.8□□□□□ -1
TPM3-213ENST00000368545 GLOD4Q9HC38 313 aa8.8□□□□□ -1
TPM3-213ENST00000368545 GKN1Q9NS71 199 aa8.8□□□□□ -1
TPM3-213ENST00000368545 RBM22Q9NW64 420 aaKnown RBP eCLIP8.8□□□□□ -1
TPM3-213ENST00000368545 SMPD4Q9NXE4 827 aa8.8□□□□□ -1
TPM3-213ENST00000368545 PSD3Q9NYI0 1048 aa8.8□□□□□ -1
TPM3-213ENST00000368545 PSMC3IPQ9P2W1 217 aaPredicted RBP8.8□□□□□ -1
TPM3-213ENST00000368545 SH3BP1Q9Y3L3 701 aa8.8□□□□□ -1
TPM3-213ENST00000368545 CACNA1GO43497 2377 aa8.79□□□□□ -1
TPM3-213ENST00000368545 ILVBLA1L0T0 632 aa8.79□□□□□ -1
TPM3-213ENST00000368545 MAN2B1O00754 1011 aa8.79□□□□□ -1
TPM3-213ENST00000368545 CSPG5O95196 566 aa8.79□□□□□ -1
TPM3-213ENST00000368545 PEX11BO96011 259 aa8.79□□□□□ -1
TPM3-213ENST00000368545 HLA-DQB2P05538 268 aa8.79□□□□□ -1
TPM3-213ENST00000368545 GSTM1P09488 218 aa8.79□□□□□ -1
TPM3-213ENST00000368545 ZNF806P0C7X5 589 aa8.79□□□□□ -1
TPM3-213ENST00000368545 MYL4P12829 197 aa8.79□□□□□ -1
TPM3-213ENST00000368545 OSMP13725 252 aa8.79□□□□□ -1
TPM3-213ENST00000368545 AGXTP21549 392 aa8.79□□□□□ -1
TPM3-213ENST00000368545 SLCO1A2P46721 670 aa8.79□□□□□ -1
TPM3-213ENST00000368545 GNA12Q03113 381 aa8.79□□□□□ -1
TPM3-213ENST00000368545 MPP3Q13368 585 aa8.79□□□□□ -1
TPM3-213ENST00000368545 MTM1Q13496 603 aa8.79□□□□□ -1
TPM3-213ENST00000368545 ARMC3Q5W041 872 aa8.79□□□□□ -1
TPM3-213ENST00000368545 CYS1Q717R9 158 aa8.79□□□□□ -1
TPM3-213ENST00000368545 TEX26Q8N6G2 289 aa8.79□□□□□ -1
TPM3-213ENST00000368545 GSDMBQ8TAX9 411 aa8.79□□□□□ -1
TPM3-213ENST00000368545 ARHGEF2Q92974 986 aaKnown RBP8.79□□□□□ -1
TPM3-213ENST00000368545 STAMBPL1Q96FJ0 436 aa8.79□□□□□ -1
TPM3-213ENST00000368545 SGCZQ96LD1 299 aa8.79□□□□□ -1
TPM3-213ENST00000368545 XPO6Q96QU8 1125 aaKnown RBP8.79□□□□□ -1
TPM3-213ENST00000368545 SLC22A12Q96S37 553 aa8.79□□□□□ -1
TPM3-213ENST00000368545 APOL5Q9BWW9 433 aa8.79□□□□□ -1
TPM3-213ENST00000368545 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
TPM3-213ENST00000368545 VPS45Q9NRW7 570 aa8.79□□□□□ -1
TPM3-213ENST00000368545 EURLQ9NYK6 297 aa8.79□□□□□ -1
TPM3-213ENST00000368545 TBC1D30Q9Y2I9 924 aa8.79□□□□□ -1
TPM3-213ENST00000368545 TTLL3Q9Y4R7 772 aa8.79□□□□□ -1
TPM3-213ENST00000368545 MAD1L1Q9Y6D9 718 aa8.79□□□□□ -1
TPM3-213ENST00000368545 NUP210Q8TEM1 1887 aaPredicted RBP8.79□□□□□ -1
TPM3-213ENST00000368545 TCRBV9S1A1TA0A576 114 aa8.78□□□□□ -1
TPM3-213ENST00000368545 ANHXE9PGG2 379 aa8.78□□□□□ -1
TPM3-213ENST00000368545 PRAMEF11O60813 436 aa8.78□□□□□ -1
TPM3-213ENST00000368545 HRGP04196 525 aa8.78□□□□□ -1
TPM3-213ENST00000368545 RHOCP08134 193 aa8.78□□□□□ -1
TPM3-213ENST00000368545 PGAM1P18669 254 aa8.78□□□□□ -1
TPM3-213ENST00000368545 HPDP32754 393 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms