RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ZBED6P86452 979 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 DDX10Q13206 875 aaKnown RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 NAB2Q15742 525 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 ADIPOQQ15848 244 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 KRTCAP3Q53RY4 240 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 GKAP1Q5VSY0 366 aaPredicted RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 NSUN5P2Q63ZY6 315 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 FAAH2Q6GMR7 532 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR7E24Q6IFN5 339 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 LCN10Q6JVE6 187 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 FAM180BQ6P0A1 224 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 PAPD4Q6PIY7 484 aaKnown RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 GDPD4Q6W3E5 623 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 GLDNQ6ZMI3 551 aaPredicted RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 CLEC17AQ6ZS10 378 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAATS1Q7Z4T9 603 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAP7D3Q8IWC1 876 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 PDILTQ8N807 584 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 LMNTD1Q8N9Z9 388 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 ANKRD52Q8NB46 1076 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR1J2Q8NGS2 313 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 HM13Q8TCT9 377 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 SGCDQ92629 289 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 SMC6Q96SB8 1091 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 SEPT5Q99719 369 aaPredicted RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 MMP28Q9H239 520 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 TXLNGQ9NUQ3 528 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 SETD4Q9NVD3 440 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 MTMR10Q9NXD2 777 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 CWC15Q9P013 229 aaKnown RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 STK39Q9UEW8 545 aa3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 CORO1CQ9ULV4 474 aaPredicted RBP3.1□□□□□ -1.91
RNU4-48P-201ENST00000365559 ARHGEF40Q8TER5 1519 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 WDR81Q562E7 1941 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 GREB1LQ9C091 1923 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 A0A1W2PP11 408 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 PGPEP1LA6NFU8 196 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 EIF4E1BA6NMX2 242 aaKnown RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 P2RY10O00398 339 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 CAPN9O14815 690 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNHIT1O43257 154 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 WDR1O75083 606 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 DDX58O95786 925 aaKnown RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 ATP1A1P05023 1023 aaKnown RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 FAM106CPP0CH98 169 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 POLR2CP19387 275 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 MT3P25713 68 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 PIK3CAP42336 1068 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 PRCPP42785 496 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 FMO5P49326 533 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 AMPHP49418 695 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 SETQ01105 290 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 MYLK3Q32MK0 819 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 TMEM35AQ53FP2 167 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 ZNF628Q5EBL2 1059 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 CCDC30Q5VVM6 783 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 FAM171BQ6P995 826 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 IKBIPQ70UQ0 350 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 RSRC2Q7L4I2 434 aaKnown RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 TBC1D1Q86TI0 1168 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 TSPAN33Q86UF1 283 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 DCUN1D3Q8IWE4 304 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 RNF168Q8IYW5 571 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 RASGEF1CQ8N431 466 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 WDTC1Q8N5D0 677 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 NGEFQ8N5V2 710 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 HJURPQ8NCD3 748 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 OR8K5Q8NH50 307 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 THAP6Q8TBB0 222 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 HDAC2Q92769 488 aaKnown RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 ELMOD3Q96FG2 381 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 EPYCQ99645 322 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 POLR3CQ9BUI4 534 aaPredicted RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 TRMT61BQ9BVS5 477 aaKnown RBP3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 MAGIXQ9H6Y5 334 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 KRT84Q9NSB2 600 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 TAAR2Q9P1P5 351 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 FBXW11Q9UKB1 542 aa3.09□□□□□ -1.91
RNU4-48P-201ENST00000365559 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZCWPW2A0A1B0GU75 182 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 KANSL1LA0AUZ9 987 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 FRMD3A2A2Y4 597 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 CTAGE9A4FU28 777 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 PI4KAP2A4QPH2 592 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 SCAMP1O15126 338 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 EIF3DO15371 548 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 LINC01565O15544 149 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLPP2O43688 288 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 WISP2O76076 250 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLGP00747 810 aaPredicted RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 CTAGE8P0CG41 777 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 CDH2P19022 906 aaPredicted RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 ACADLP28330 430 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 PPARGP37231 505 aaPredicted RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 DCAF7P61962 342 aa3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 PITX1P78337 314 aaPredicted RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 PDE1CQ14123 709 aaPredicted RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 EIF4A2Q14240 407 aaKnown RBP3.08□□□□□ -1.92
RNU4-48P-201ENST00000365559 ACCSLQ4AC99 568 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms