RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 FGF5P12034 268 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 UGT1A1P22309 533 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 RGS2P41220 211 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 CCR9P51686 369 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 HILS1P60008 231 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 RUNX1T1Q06455 604 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 GOLGA8DPQ0D2H9 430 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 SREBF2Q12772 1141 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 CSTF3Q12996 717 aaKnown RBP3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 CDC16Q13042 620 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 GAGE5Q13069 117 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 GAGE6Q13070 117 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 CCNYL2Q5T2Q4 361 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 PAPD4Q6PIY7 484 aaKnown RBP3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 DIS3L2Q8IYB7 885 aaKnown RBP3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 OR1J2Q8NGS2 313 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 ETNPPLQ8TBG4 499 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 KCNG4Q8TDN1 519 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 ARHGEF26Q96DR7 871 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 ST6GAL2Q96JF0 529 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 SIL1Q9H173 461 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 LRMDAQ9H2I8 198 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 UPF2Q9HAU5 1272 aaKnown RBP3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 MARCH4Q9P2E8 410 aaPredicted RBP3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 PGAP2Q9UHJ9 254 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 CLIC4Q9Y696 253 aa3.89□□□□□ -1.79
RNU6-553P-201ENST00000364047 IGLV5-45A0A087WSX0 123 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 A0A1W2PQF6 199 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 CTAGE9A4FU28 777 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 NTN3O00634 580 aaPredicted RBP3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 ATP2A1O14983 1001 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 SYNGR3O43761 229 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZG16O60844 167 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 KCNK5O95279 499 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 MLYCDO95822 493 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 CTAGE8P0CG41 777 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 BSGP35613 385 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 PRCPP42785 496 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZBED6P86452 979 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 PDE1CQ14123 709 aaPredicted RBP3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 PNLIPRP3Q17RR3 467 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 KRTCAP3Q53RY4 240 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 CYP20A1Q6UW02 462 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 CTAGE4Q8IX94 777 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 KLHDC9Q8NEP7 349 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 IL17REQ8NFR9 667 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZNF501Q96CX3 271 aaPredicted RBP3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZNF354BQ96LW1 612 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 PIGMQ9H3S5 423 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 TCP11L1Q9NUJ3 509 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 CWC15Q9P013 229 aaKnown RBP3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 COPG2Q9UBF2 871 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 LIMA1Q9UHB6 759 aaKnown RBP3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 TMEM98Q9Y2Y6 226 aa3.88□□□□□ -1.79
RNU6-553P-201ENST00000364047 OR5K3A6NET4 321 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 EIF4E1BA6NMX2 242 aaKnown RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 EDIL3O43854 480 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 PAX1P15863 534 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 NR1D1P20393 614 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 AHRP35869 848 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 ARCN1P48444 511 aaKnown RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 TBCEQ15813 527 aaPredicted RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 TSTQ16762 297 aaKnown RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZNF805Q5CZA5 627 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 INTS11Q5TA45 600 aaKnown RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 CEACAM20Q6UY09 585 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 SEPT14Q6ZU15 432 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 PLEKHM3Q6ZWE6 761 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 CPLX4Q7Z7G2 160 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 SDCCAG8Q86SQ7 713 aaPredicted RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 ADSSL1Q8N142 457 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 CNBD1Q8NA66 436 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 PCYOX1LQ8NBM8 494 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 OR10V1Q8NGI7 309 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 UTP15Q8TED0 518 aaKnown RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 WBP2Q969T9 261 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 PHF21AQ96BD5 680 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 SCRN2Q96FV2 425 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 PERPQ96FX8 193 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 SMC6Q96SB8 1091 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZNF696Q9H7X3 374 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 POLR1BQ9H9Y6 1135 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 DDX43Q9NXZ2 648 aaKnown RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 UBA2Q9UBT2 640 aaPredicted RBP3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 KCNE2Q9Y6J6 123 aa3.87□□□□□ -1.79
RNU6-553P-201ENST00000364047 FAM237BA0A1B0GVD1 139 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 A0A1W2PP11 408 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 KANSL1LA0AUZ9 987 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 PMS2P5A8MQ11 134 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 H3BQ06 376 aaPredicted RBP3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 RTN3O95197 1032 aaPredicted RBP3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 APOHP02749 345 aaPredicted RBP3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 ICAM1P05362 532 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 CLEC3BP05452 202 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 ZNF23P17027 643 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 NR2F2P24468 414 aa3.86□□□□□ -1.79
RNU6-553P-201ENST00000364047 ATP12AP54707 1039 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms