RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 FABP12A6NFH5 140 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 CCR3P51677 355 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SYVN1Q86TM6 617 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SLC44A3Q8N4M1 653 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MTMR8Q96EF0 704 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ZSWIM3Q96MP5 696 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TP73O15350 636 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 GSTCDQ8NEC7 633 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MED31Q9Y3C7 131 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 DCLK1O15075 740 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 CCNB2O95067 398 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 AXLP30530 894 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 BST1Q10588 318 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 PLA2G12BQ9BX93 195 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TRPV2Q9Y5S1 764 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 FPGTO14772 594 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TRBC1P01850 177 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TFPIP10646 304 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 EPCAMP16422 314 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 FOXO4P98177 505 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 C6orf52Q5T4I8 152 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 RAET1GQ6H3X3 334 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 FAM83AQ86UY5 434 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MROH8Q9H579 483 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 OR3A3P47888 321 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 OR3A2P47893 321 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 PSEN1P49768 467 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 RNF220Q5VTB9 566 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 C5orf34Q96MH7 638 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SNX15Q9NRS6 342 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 DNASE1L2Q92874 299 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 HIST1H2AAQ96QV6 131 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TRPV4Q9HBA0 871 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 GAKO14976 1311 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ZSCAN5BA6NJL1 495 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SASH3O75995 380 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 MATN4O95460 622 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 RARAP10276 462 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF670Q9BS34 389 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TMEM27Q9HBJ8 222 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 RDH8Q9NYR8 311 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ELOVL7A1L3X0 281 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TGFB3P10600 412 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PGAM2P15259 253 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ITPKBP27987 946 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 MIPP30301 263 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PLEKHG4Q58EX7 1191 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 LDLRAP1Q5SW96 308 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 DENND1CQ8IV53 801 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FARSAQ9Y285 508 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SCN2BO60939 215 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 RPS9P46781 194 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PCDH1Q08174 1060 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 KIF1AQ12756 1690 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ATP6V1G1O75348 118 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TPTEP56180 551 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF782Q6ZMW2 699 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF410Q86VK4 478 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PHC2Q8IXK0 858 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 AP2M1Q96CW1 435 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PDE10AQ9Y233 779 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TACSTD2P09758 323 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ACADVLP49748 655 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 NUMBP49757 651 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FCGRTP55899 365 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 NT5DC1Q5TFE4 455 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZBTB46Q86UZ6 589 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CCDC28AQ8IWP9 274 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ROPN1LQ96C74 230 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TLR10Q9BXR5 811 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 C14orf105Q9NVL8 296 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 C14orf166Q9Y224 244 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TRIM64CA6NLI5 447 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 H0Y858 1186 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ERAL1O75616 437 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 AZGP1P25311 298 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 RBL1P28749 1068 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SSR2P43308 183 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 C6orf183Q5T699 404 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TMEM161BQ8NDZ6 487 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 KCTD15Q96SI1 283 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ACSS3Q9H6R3 686 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SGK2Q9HBY8 427 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 EQTNQ9NQ60 294 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 GPRC5CQ9NQ84 441 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TRAF6Q9Y4K3 522 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PRR5P85299 388 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SUSD6Q92537 303 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 NKD1Q969G9 470 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SLC38A4Q969I6 547 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CENPNQ96H22 339 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 BLOC1S4Q9NUP1 217 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZNRF3Q9ULT6 936 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CCL15-CCL14A0A0B4J2E2 113 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 GSC2O15499 205 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TBX1O43435 398 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CXCL8P10145 99 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CCL15Q16663 113 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms