RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 HCN1O60741 890 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 WFS1O76024 890 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 NDST3O95803 873 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 VIPP01282 170 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 C8GP07360 202 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 FGFR3P22607 806 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 GABRR2P28476 465 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 FAM110CQ1W6H9 321 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 UBR7Q8N806 425 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ADAMTS15Q8TE58 950 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PRCCQ92733 491 aaPredicted RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 ARHGAP20Q9P2F6 1191 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PRORSD1PA6NEY8 169 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 AKAP8O43823 692 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 ITIH1P19827 911 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TAS2R50P59544 299 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ZNF662Q6ZS27 426 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 CUZD1Q86UP6 607 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PIGZQ86VD9 579 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 CREG2Q8IUH2 290 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 BPIFB6Q8NFQ5 453 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 FCRL4Q96PJ5 515 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 WDR18Q9BV38 432 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 RUVBL1Q9Y265 456 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 ITGA2BP08514 1039 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.879e-7■■■□□ 16.7
CUX1-203ENST00000360264 SLC24A5Q71RS6 500 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 WASHC1A8K0Z3 465 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 A8MX80 341 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 WASH3PC4AMC7 463 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TRIM3O75382 744 aaPredicted RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 SERPINA3P01011 423 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TFEBP19484 476 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 GRM5P41594 1212 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 MAPK12P53778 367 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 RAPSNQ13702 412 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 DENND5AQ6IQ26 1287 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 WASH2PQ6VEQ5 465 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 RIMS1Q86UR5 1692 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 OR2T34Q8NGX1 318 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 DNAJB14Q8TBM8 379 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 OR2AG2A6NM03 316 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 IRF6O14896 467 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ERAL1O75616 437 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 ZBTB6Q15916 424 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 MED27Q6P2C8 311 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 RFT1Q96AA3 541 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 NSMCE3Q96MG7 304 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 LHX5Q9H2C1 402 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 IFT80Q9P2H3 777 aaPredicted RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 ACACAQ13085 2346 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 REM1O75628 298 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 RLN1P04808 185 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PSMD8P48556 350 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 B3GALT6Q96L58 329 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TIMMDC1Q9NPL8 285 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SPATA31C2B4DYI2 1134 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 NEDD8-MDP1E9PL57 170 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 B3GALT2O43825 422 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SHROOM3Q8TF72 1996 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 FSBPO95073 299 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PKNOX1P55347 436 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 WNT3AP56704 352 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ENPEPQ07075 957 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ILF3Q12906 894 aaKnown RBP eCLIP9.63□□□□□ -0.874e-7■■■■□ 21.7
CUX1-203ENST00000360264 TUSC3Q13454 348 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TUBB3Q13509 450 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 C12orf56Q8IXR9 622 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 C12orf50Q8NA57 414 aaPredicted RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 HDAC10Q969S8 669 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 C5orf34Q96MH7 638 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 DDX18Q9NVP1 670 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 FBXO5Q9UKT4 447 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 C22orf31O95567 290 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PRDX6P30041 224 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 VSIG10LQ86VR7 867 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ZNF527Q8NB42 609 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PIGXQ8TBF5 258 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TRNT1Q96Q11 434 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 BHLHE41Q9C0J9 482 aaPredicted RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 PFDN2Q9UHV9 154 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 OR14I1A6ND48 311 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 KLRK1P26718 216 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 ANO7Q6IWH7 933 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 KBTBD2Q8IY47 623 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 TCF25Q9BQ70 676 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 MRPS7Q9Y2R9 242 aaKnown RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 RHPN2P1A8MT19 583 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 GABRB2P47870 512 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 NDST2P52849 883 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 NAGLUP54802 743 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PSME3P61289 254 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 MSL3Q8N5Y2 521 aaKnown RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 ATAD1Q8NBU5 361 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 CYP2W1Q8TAV3 490 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 DNAJA4Q8WW22 397 aaPredicted RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 SNAPC5O75971 98 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 RPL5P46777 297 aaKnown RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 ABATP80404 500 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms