RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LGMNQ99538 433 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 IQCMA0A1B0GVH7 501 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 MID1O15344 667 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 NOS2P35228 1153 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 NOMO3P69849 1222 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF773Q6PK81 442 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 VSTM1Q6UX27 236 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 RIOX2Q8IUF8 465 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 RDH8Q9NYR8 311 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GMIPQ9P107 970 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SCGNO76038 276 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CYP3A7P24462 503 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CTBP1Q13363 440 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CAMK1Q14012 370 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 PTPN20Q4JDL3 420 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CXorf57Q6NSI4 855 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 DET1Q7L5Y6 550 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SLC26A9Q7LBE3 791 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ELMO3Q96BJ8 720 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 TKTL2Q9H0I9 626 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CHMP1AQ9HD42 196 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 KLK14Q9P0G3 267 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GULP1Q9UBP9 304 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 BOLA2-SMG1P6H3BVE0 249 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SMIM22K7EJ46 135 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 PLIN3O60664 434 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ADRB2P07550 413 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GOT1P17174 413 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 TBX4P57082 545 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GTF2BQ00403 316 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 HSD17B12Q53GQ0 312 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 IL23RQ5VWK5 629 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 TMEM214Q6NUQ4 689 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 MON1BQ7L1V2 547 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 MRPL45Q9BRJ2 306 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 RABL2AQ9UBK7 228 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SEC14L4Q9UDX3 406 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SPATA31A3Q5VYP0 1347 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SMCO3A2RU48 225 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 C2P06681 752 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ARF3P61204 181 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ARF1P84077 181 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF45Q02386 682 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 MYBPC3Q14896 1274 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ARHGAP15Q53QZ3 475 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 APTXQ7Z2E3 356 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 PHACTR4Q8IZ21 702 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 OR4A15Q8NGL6 344 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 KPNA3O00505 521 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 AP3D1O14617 1153 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 KLF11O14901 512 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ACOX3O15254 700 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 NTSR2O95665 410 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 FGFR1P11362 822 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 MMP8P22894 467 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 PBLDP30039 288 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 DCDC1P59894 354 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF267Q14586 743 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 RFTN2Q52LD8 501 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ARSHQ5FYA8 562 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 FAM156AQ8NDB6 213 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 LRRC3Q9BY71 257 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 TBC1D14Q9P2M4 693 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 LRATO95237 230 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ERBB2P04626 1255 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CSTF1Q05048 431 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SLC18A2Q05940 514 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 USP30Q70CQ3 517 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF438Q7Z4V0 828 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 TTC29Q8NA56 475 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 UFD1Q92890 307 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 AURKBQ96GD4 344 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CRAMP1Q96RY5 1269 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 AGAP2Q99490 1192 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 RCOR3Q9P2K3 495 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 POLR1DQ9Y2S0 133 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 OTOFQ9HC10 1997 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 RBM47A0AV96 593 aaKnown RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 ZSCAN5BA6NJL1 495 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 CHP2O43745 196 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 CREB1P16220 341 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 PRKD1Q15139 912 aaPredicted RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 FSTL4Q6MZW2 842 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 SMG8Q8ND04 991 aaKnown RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 POF1BQ8WVV4 589 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 ASB12Q8WXK4 309 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 KCTD15Q96SI1 283 aaPredicted RBP8.71□□□□□ -1.01
COL6A6-201ENST00000358511 MAFFQ9ULX9 164 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 NCKAP1Q9Y2A7 1128 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 ITM2AO43736 263 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 THP07101 528 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 CYP3A4P08684 503 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 LSAMPQ13449 338 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 PGM5Q15124 567 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 CPTPQ5TA50 214 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 LENG9Q96B70 501 aa8.71□□□□□ -1.01
COL6A6-201ENST00000358511 TMEM59LQ9UK28 342 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms