RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 CCDC68Q9H2F9 335 aa13.71□□□□□ -0.21
EBF3-201ENST00000355311 PRDM16Q9HAZ2 1276 aa13.71□□□□□ -0.21
EBF3-201ENST00000355311 MAP10Q9P2G4 905 aa13.71□□□□□ -0.21
EBF3-201ENST00000355311 VTI1BQ9UEU0 232 aa13.71□□□□□ -0.21
EBF3-201ENST00000355311 TRIM17Q9Y577 477 aa13.71□□□□□ -0.21
EBF3-201ENST00000355311 RNF103-CHMP3A0A140T963 221 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.71□□□□□ -0.22
EBF3-201ENST00000355311 NDUFS3O75489 264 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.22
EBF3-201ENST00000355311 MTHFD2P13995 350 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 CD1DP15813 335 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 NFKBIAP25963 317 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 STX1BP61266 288 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 CBLBQ13191 982 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 LRP8Q14114 963 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 HMBOX1Q6NT76 420 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 ZBTB49Q6ZSB9 765 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 CNDP1Q96KN2 507 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 APOL5Q9BWW9 433 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 TDRD1Q9BXT4 1180 aaKnown RBP13.71□□□□□ -0.22
EBF3-201ENST00000355311 ZNF696Q9H7X3 374 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.22
EBF3-201ENST00000355311 EIF2B4Q9UI10 523 aaKnown RBP13.71□□□□□ -0.22
EBF3-201ENST00000355311 FCF1Q9Y324 198 aaKnown RBP13.71□□□□□ -0.22
EBF3-201ENST00000355311 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 REV3LO60673 3130 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 A0A087X1B8 175 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 HTR3EA5X5Y0 456 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 TRIM38O00635 465 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 NME4O00746 187 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 CACNG3O60359 315 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 ADAMTS4O75173 837 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 BCAS2O75934 225 aaPredicted RBP13.7□□□□□ -0.22
EBF3-201ENST00000355311 OR1D2P34982 312 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 DGKQP52824 942 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 MRPL10Q7Z7H8 261 aaKnown RBP13.7□□□□□ -0.22
EBF3-201ENST00000355311 CNTN4Q8IWV2 1026 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 SLC22A15Q8IZD6 547 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 LZTR1Q8N653 840 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 CYGBQ8WWM9 190 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 UBXN10Q96LJ8 280 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 ZNF385DQ9H6B1 395 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
EBF3-201ENST00000355311 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 COQ6Q9Y2Z9 468 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 ARHGEF37A1IGU5 675 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 FUOMA2VDF0 154 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 C2orf78A6NCI8 922 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 A8MU76 341 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 SEPT4O43236 478 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 OR4F21O95013 312 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 ATE1O95260 518 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 KLKB1P03952 638 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 IMPDH1P20839 514 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 TACR2P21452 398 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 UGT1A1P22309 533 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 UGT1A4P22310 534 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 UGT1A3P35503 534 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 UGT1A5P35504 534 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 PHEXP78562 749 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 BNIP3Q12983 259 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 PAGE3Q5JUK9 113 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 KRT80Q6KB66 452 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 TMEM214Q6NUQ4 689 aaKnown RBP13.7□□□□□ -0.22
EBF3-201ENST00000355311 SNX29P2Q8IUI4 249 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 ERI1Q8IV48 349 aaKnown RBP13.7□□□□□ -0.22
EBF3-201ENST00000355311 SLC39A13Q96H72 371 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 PPM1MQ96MI6 270 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 RANBP9Q96S59 729 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 POLR1EQ9GZS1 481 aaKnown RBP13.7□□□□□ -0.22
EBF3-201ENST00000355311 EML4Q9HC35 981 aaKnown RBP13.7□□□□□ -0.22
EBF3-201ENST00000355311 ATP13A1Q9HD20 1204 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 CD274Q9NZQ7 290 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 ZNHIT2Q9UHR6 403 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 PCDHB9Q9Y5E1 797 aa13.7□□□□□ -0.22
EBF3-201ENST00000355311 TRIOO75962 3097 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 LSM1O15116 133 aaKnown RBP13.69□□□□□ -0.22
EBF3-201ENST00000355311 PSMD3O43242 534 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 ZBTB11O95625 1053 aaPredicted RBP13.69□□□□□ -0.22
EBF3-201ENST00000355311 SERPINF2P08697 491 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 RBP1P09455 135 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 OCM2P0CE71 109 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 OCMP0CE72 109 aaPredicted RBP13.69□□□□□ -0.22
EBF3-201ENST00000355311 RHOQP17081 205 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 XIAPP98170 497 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 SERINC3Q13530 473 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 ACAP2Q15057 778 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
EBF3-201ENST00000355311 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 RGMBQ6NW40 437 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 FBXO39Q8N4B4 442 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 CBR4Q8N4T8 237 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 ATP6V0D2Q8N8Y2 350 aa13.69□□□□□ -0.22
EBF3-201ENST00000355311 TMEM102Q8N9M5 508 aaPredicted RBP13.69□□□□□ -0.22
EBF3-201ENST00000355311 FAM47BQ8NA70 645 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms