RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 UROSP10746 265 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 CES1P23141 567 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC6A4P31645 630 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 BUD31P41223 144 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 EPHB3P54753 998 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 XKRXQ6PP77 449 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 STRADAQ7RTN6 431 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 BUD23O43709 281 aaKnown RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 GSTT2BP0CG30 244 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 MAPK12P53778 367 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNHIT3Q15649 155 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TIGD6Q17RP2 521 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 LINC00116Q8NCU8 138 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 FAM156AQ8NDB6 213 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 RFKQ969G6 155 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TMEM169Q96HH4 297 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNHIT2Q9UHR6 403 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TNFSF13BQ9Y275 285 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 JCADQ9P266 1359 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SNAPC5O75971 98 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 APOC1P02654 83 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 OAZ1P54368 228 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 NRG1Q02297 640 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 LCP2Q13094 533 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 HLA-DQA1Q5Y7H0 255 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 ANKRD23Q86SG2 305 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 CHURC1-FNTBB4DL54 471 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 NKRFO15226 690 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■□□□□ 8.7
SYNCRIP-201ENST00000355238 CHP2O43745 196 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC15A1P46059 708 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 ASMTP46597 345 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 MMP14P50281 582 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 ANKRD22Q5VYY1 191 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 RNF44Q7L0R7 432 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 MKL1Q969V6 931 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SEMA3CQ99985 751 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 GULP1Q9UBP9 304 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 RAB23Q9ULC3 237 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 COL3A1P02461 1466 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 H3BRB1 525 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 WSCD2Q2TBF2 565 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 CYP4X1Q8N118 509 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 HASPINQ8TF76 798 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 CRELD1Q96HD1 420 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 FCRL4Q96PJ5 515 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TUT1Q9H6E5 874 aaKnown RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 TP73O15350 636 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CPNE3O75131 537 aaKnown RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GCATO75600 419 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 NUDT14O95848 222 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ARFIP1P53367 373 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 WNT3AP56704 352 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 MXD1Q05195 221 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 MAB21L1Q13394 359 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GRIK4Q16099 956 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 FBXO43Q4G163 708 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 PAOXQ6QHF9 649 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CHST15Q7LFX5 561 aaPredicted RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DNAJB8Q8NHS0 232 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DCSTAMPQ9H295 470 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ZNF490Q9ULM2 529 aaPredicted RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CEP170BQ9Y4F5 1589 aaPredicted RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ACOX3O15254 700 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 TRBC1P01850 177 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 IL1R1P14778 569 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 ACOX1Q15067 660 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 TPRG1LQ5T0D9 272 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CXorf57Q6NSI4 855 aaKnown RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 PIGZQ86VD9 579 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 PLD5Q8N7P1 536 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GPR156Q8NFN8 814 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CLHC1Q8NHS4 586 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 UFD1Q92890 307 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 STXBP5LQ9Y2K9 1186 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CXCR6O00574 342 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 FPGTO14772 594 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CDH1P12830 882 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 S100GP29377 79 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 CDH5P33151 784 aaPredicted RBP12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 TEX44Q53QW1 395 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 GCNT6Q5T4J0 391 aa12.63□□□□□ -0.39
SYNCRIP-201ENST00000355238 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms