RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MLLT10P55197 1068 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 HYAL1Q12794 435 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 SEMA5AQ13591 1074 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 BMPR2Q13873 1038 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 DLG2Q15700 870 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 BBS9Q3SYG4 887 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 PARP15Q460N3 678 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 ZNF697Q5TEC3 545 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 ATG14Q6ZNE5 492 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 FRMD7Q6ZUT3 714 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 TFAP2DQ7Z6R9 452 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 GPR180Q86V85 440 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 CIR1Q86X95 450 aaPredicted RBP10.07□□□□□ -0.8
SYNE1-203ENST00000354674 AHI1Q8N157 1196 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 EFHBQ8N7U6 833 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 KIAA1958Q8N8K9 716 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 ELMO1Q92556 727 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 FIG4Q92562 907 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 ZFYVE19Q96K21 471 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 PAFAH2Q99487 392 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 IL12RB2Q99665 862 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 NSUN3Q9H649 340 aaKnown RBP10.07□□□□□ -0.8
SYNE1-203ENST00000354674 CXorf21Q9HAI6 301 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 CFAP97Q9P2B7 532 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 IGSF9Q9P2J2 1179 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 TRHDEQ9UKU6 1024 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 UGT2A1Q9Y4X1 527 aa10.07□□□□□ -0.8
SYNE1-203ENST00000354674 C2orf16Q68DN1 1984 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 AURKAO14965 403 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 DCXO43602 365 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 METTL18O95568 372 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 GMPRP36959 345 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 COPAP53621 1224 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SLC13A2Q13183 592 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 APOFQ13790 326 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TEX44Q53QW1 395 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SNAP47Q5SQN1 464 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ANKRD22Q5VYY1 191 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TIGD7Q6NT04 549 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ATPAF2Q8N5M1 289 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SPERTQ8NA61 448 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TANKQ92844 425 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 HMCESQ96FZ2 354 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CIB1Q99828 191 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CTRCQ99895 268 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PSMC3IPQ9P2W1 217 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 LSM7Q9UK45 103 aaKnown RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 DOCK6Q96HP0 2047 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 A0A1B0GVM2 712 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TCRBV7S3A2A0A539 114 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TCAF2A6NFQ2 919 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 DFFAO00273 331 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CKMT2P17540 419 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CEBPBP17676 345 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 GRIA3P42263 894 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 RPS24P62847 133 aaKnown RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SERINC3Q13530 473 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 LRIT3Q3SXY7 679 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 MPP7Q5T2T1 576 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ZNF783Q6ZMS7 281 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ELMOD2Q8IZ81 293 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CFAP52Q8N1V2 620 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 C12orf76Q8N812 135 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PCYOX1LQ8NBM8 494 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 BPIFB6Q8NFQ5 453 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CHPT1Q8WUD6 406 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 DEPDC1BQ8WUY9 529 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SMG7Q92540 1137 aaKnown RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 MOCOSQ96EN8 888 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 RMND5BQ96G75 393 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ZSWIM3Q96MP5 696 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 MAGEH1Q9H213 219 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CCL26Q9Y258 94 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 H3BMQ9 156 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SULT1C4O75897 302 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TMEM63AO94886 807 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ZNF23P17027 643 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TPSB2P20231 275 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 OR1E1P30953 314 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 CD68P34810 354 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SERPINB5P36952 375 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 RAD23AP54725 363 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PMS2P3Q13401 168 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TPSAB1Q15661 275 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ZNF77Q15935 545 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ADRM1Q16186 407 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 OFCC1Q8IZS5 231 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TEX26Q8N6G2 289 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 MCUQ8NE86 351 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 BHLHE22Q8NFJ8 381 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 SH3RF2Q8TEC5 729 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 PPWD1Q96BP3 646 aaKnown RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 OMA1Q96E52 524 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 ZNF419Q96HQ0 510 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-203ENST00000354674 TEKT5Q96M29 485 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 COG8Q96MW5 612 aa10.06□□□□□ -0.8
SYNE1-203ENST00000354674 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms