RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 KCNU1A8MYU2 1149 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RFXAPO00287 272 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ENO1P06733 434 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NDUFB7P17568 137 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 LAG3P18627 525 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PSMA3P25788 255 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HSPA4P34932 840 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RFC1P35251 1148 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 GPR143P51810 404 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 BMXP51813 675 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NXPH1P58417 271 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 KLHL30Q0D2K2 578 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CBX3Q13185 183 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 STIM1Q13586 685 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TBC1D25Q3MII6 688 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 USP39Q53GS9 565 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 C10orf76Q5T2E6 689 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TSTD2Q5T7W7 516 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ASPHD1Q5U4P2 390 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MRGPREQ86SM8 312 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CHSY1Q86X52 802 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SFTPA1Q8IWL2 248 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 KLHL7Q8IXQ5 586 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 IQUBQ8NA54 791 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CTCFLQ8NI51 663 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 GSDMBQ8TAX9 411 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ARRDC2Q8TBH0 407 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 GRAPLQ8TC17 118 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RHBDF1Q96CC6 855 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PGBD1Q96JS3 809 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RMDN2Q96LZ7 410 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TSGA13Q96PP4 275 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ACOX2Q99424 681 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OSBPL8Q9BZF1 889 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SPRY4Q9C004 299 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SLC5A7Q9GZV3 580 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PPP1R3EQ9H7J1 279 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MCM9Q9NXL9 1143 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CGNQ9P2M7 1197 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HEY2Q9UBP5 337 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 AMACRQ9UHK6 382 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OSGIN1Q9UJX0 560 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PADI3Q9ULW8 664 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RABL2BQ9UNT1 228 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HBS1LQ9Y450 684 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TRIM17Q9Y577 477 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TEX264Q9Y6I9 313 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 JCADQ9P266 1359 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TYW5A2RUC4 315 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM200CA6NKL6 621 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 B4DGG1 531 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM189-UBE2V1I3L0A0 370 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ZBTB43O43298 467 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SMPD2O60906 423 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SOCS5O75159 536 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 IFNB1P01574 187 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MMP2P08253 660 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 AKR1A1P14550 325 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PRLRP16471 622 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 FERP16591 822 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PTPN2P17706 415 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CD27P26842 260 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 DCTDP32321 178 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PPP3CCP48454 512 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 UBE2V1Q13404 147 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PPIGQ13427 754 aaKnown RBP eCLIP1.64□□□□□ -2.152e-6■■■■□ 20.9
BRCA1-202ENST00000354071 ARHGEF6Q15052 776 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SMU1Q2TAY7 513 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 WSCD2Q2TBF2 565 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MAJINQ3KP22 176 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PAPPA-AS1Q5QFB9 102 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 Q6ZNX1 250 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PQLC2Q6ZP29 291 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MTSS1LQ765P7 747 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MEPCEQ7L2J0 689 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD13BQ86YJ7 626 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 C1orf210Q8IVY1 113 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 SERPINA12Q8IW75 414 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NEXN-AS1Q8NBZ9 246 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ACVR1CQ8NER5 493 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OR52E1Q8NGJ3 308 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CAGE1Q8TC20 777 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NSMCE1Q8WV22 266 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 HEXDCQ8WVB3 486 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 FUBP1Q96AE4 644 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 ATP6V0BQ99437 205 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM47Q9BQJ4 181 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 FAM234AQ9H0X4 552 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 OSGEPL1Q9H4B0 414 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MID1IP1Q9NPA3 183 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 MYNNQ9NPC7 610 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PDRG1Q9NUG6 133 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 TCP11L1Q9NUJ3 509 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 BLOC1S6Q9UL45 172 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 WBP11Q9Y2W2 641 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 NFS1Q9Y697 457 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 POLR2AP24928 1970 aaKnown RBP1.64□□□□□ -2.15
BRCA1-202ENST00000354071 PHLPP1O60346 1717 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 CPED1A4D0V7 1026 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 K7EPI3 171 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms