RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RBP1P09455 135 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 UMPSP11172 480 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ERCC2P18074 760 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SLC1A2P43004 574 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 OR4D2P58180 307 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PITX1P78337 314 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SP2Q02086 613 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SIM2Q14190 667 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SYT16Q17RD7 645 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 NOL9Q5SY16 702 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 BTBD8Q5XKL5 378 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 GADL1Q6ZQY3 521 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ARHGAP36Q6ZRI8 547 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 LARP4Q71RC2 724 aaKnown RBP eCLIP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RAB44Q7Z6P3 723 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 GALNT13Q8IUC8 556 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 LYSMD2Q8IV50 215 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 GALNT12Q8IXK2 581 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 IQCF2Q8IXL9 164 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CLYBLQ8N0X4 340 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CELF2-AS1Q8N7Q2 184 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PPHLN1Q8NEY8 458 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 OR52K2Q8NGK3 314 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 OR6P1Q8NGX9 317 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RHOXF1Q8NHV9 184 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TWIST2Q8WVJ9 160 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 FAR1Q8WVX9 515 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 KHSRPQ92945 711 aaKnown RBP eCLIP7.59□□□□□ -1.194e-9■■■□□ 15.2
BRCA1-201ENST00000352993 TTYH2Q9BSA4 534 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CDT1Q9H211 546 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SCN3BQ9NY72 215 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 VWA7Q9Y334 891 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 MICAL3Q7RTP6 2002 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 A0A087X1B8 175 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TTC24A2A3L6 582 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 EFCAB9A8MZ26 197 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TARM1B6A8C7 271 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 HCRTO43612 131 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 KCNK2O95069 426 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 LTA4HP09960 611 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ITGB6P18564 788 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PIGAP37287 484 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 OR2B6P58173 313 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 MTPNP58546 118 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 GNG2P59768 71 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TOP3AQ13472 1001 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 NPTX1Q15818 432 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PCSK7Q16549 785 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CTU2Q2VPK5 515 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 LDB1Q86U70 411 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 OR8H2Q8N162 312 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SVOPQ8N4V2 548 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SLC7A14Q8TBB6 771 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 STON2Q8WXE9 905 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 KIF12Q96FN5 646 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CEP19Q96LK0 163 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 MRPL45Q9BRJ2 306 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 MLPHQ9BV36 600 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 FICDQ9BVA6 458 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 OR2B2Q9GZK3 357 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RIBC2Q9H4K1 309 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RPRD1BQ9NQG5 326 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PRDM8Q9NQV8 689 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ENTPD7Q9NQZ7 604 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PAK1IP1Q9NWT1 392 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 FBXO5Q9UKT4 447 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ITM2BQ9Y287 266 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 N6AMT1Q9Y5N5 214 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 DFFAO00273 331 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TFECO14948 347 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ICMTO60725 284 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PLA2G6O60733 806 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 MT-CYBP00156 380 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PAMP19021 973 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 FMO4P31512 558 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RBP5P82980 135 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PFKFB4Q16877 469 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 CEP78Q5JTW2 689 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 STRADAQ7RTN6 431 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SLC22A9Q8IVM8 553 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 MFSD6LQ8IWD5 586 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ELMOD2Q8IZ81 293 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 DCP1BQ8IZD4 617 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF540Q8NDQ6 660 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PIK3C3Q8NEB9 887 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 DNERQ8NFT8 737 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 RNF34Q969K3 372 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM125Q96AQ2 219 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 LGALS12Q96DT0 336 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 GPR78Q96P69 363 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 YME1L1Q96TA2 773 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 TBCDQ9BTW9 1192 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 FSD1LQ9BXM9 530 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 C2orf40Q9H1Z8 148 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 DCSTAMPQ9H295 470 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 SP140LQ9H930 580 aa7.59□□□□□ -1.19
BRCA1-201ENST00000352993 INTS7Q9NVH2 962 aaKnown RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 PAQR5Q9NXK6 330 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-201ENST00000352993 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms