RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 LHX8Q68G74 356 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 SATL1Q86VE3 508 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 HHIPL1Q96JK4 782 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 SMIM14Q96QK8 99 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 SLC30A3Q99726 388 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 ADGRE3Q9BY15 652 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 FKBPLQ9UIM3 349 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 PCTPQ9UKL6 214 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 PHF24Q9UPV7 400 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 GPR45Q9Y5Y3 372 aa21.98■■□□□ 1.11
UPF3A-201ENST00000351487 EME2A4GXA9 379 aaPredicted RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 BTN3A1O00481 513 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 MLYCDO95822 493 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 FAM58BPP0C7Q3 252 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 MC4RP32245 332 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 RPL5P46777 297 aaKnown RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 NME5P56597 212 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 XKR7Q5GH72 579 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 CTSL3PQ5NE16 218 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 ADGRF1Q5T601 910 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 CXorf57Q6NSI4 855 aaKnown RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 BLOC1S3Q6QNY0 202 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 FAM43BQ6ZT52 329 aaPredicted RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 SPATA19Q7Z5L4 167 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 CHERPQ8IWX8 916 aaKnown RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 SLC15A3Q8IY34 581 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 LRCH3Q96II8 777 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 ZFRQ96KR1 1074 aaKnown RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 MRPS26Q9BYN8 205 aaKnown RBP21.97■■□□□ 1.11
UPF3A-201ENST00000351487 SEMA6AQ9H2E6 1030 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 COQ10BQ9H8M1 238 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 GALPQ9UBC7 116 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 LZTS1Q9Y250 596 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 PCDHGC4Q9Y5F7 938 aa21.97■■□□□ 1.11
UPF3A-201ENST00000351487 KIF3CO14782 793 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 CSPG5O95196 566 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 PGM3O95394 542 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 ESRRBO95718 433 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 EFEMP2O95967 443 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 HMGA1P17096 107 aaKnown RBP21.96■■□□□ 1.11
UPF3A-201ENST00000351487 ATP6V1B2P21281 511 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 ADARP55265 1226 aaKnown RBP21.96■■□□□ 1.11
UPF3A-201ENST00000351487 ARF5P84085 180 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 BNIP2Q12982 314 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 BFSP2Q13515 415 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 GK3PQ14409 553 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 HMBOX1Q6NT76 420 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 TTC30BQ8N4P2 665 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 CD200R1Q8TD46 325 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 NAT14Q8WUY8 206 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 SEPT8Q92599 483 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 KCNJ9Q92806 393 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 GID8Q9NWU2 228 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 TRMT6Q9UJA5 497 aaKnown RBP21.96■■□□□ 1.11
UPF3A-201ENST00000351487 SNX13Q9Y5W8 968 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 COMMD3-BMI1R4GMX3 469 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 ANAPC1Q9H1A4 1944 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 C7orf72A4D263 438 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 AQP12BA6NM10 295 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 CRCPO75575 148 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 CLPTM1O96005 669 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 TFAP2AP05549 437 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 TXNL4AP83876 142 aaKnown RBP21.96■■□□□ 1.11
UPF3A-201ENST00000351487 TRAF2Q12933 501 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 MTX3Q5HYI7 312 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 PITRM1Q5JRX3 1037 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 AQP12AQ8IXF9 295 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 GOLM1Q8NBJ4 401 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 OSBPL11Q9BXB4 747 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 COMMD10Q9Y6G5 202 aa21.96■■□□□ 1.11
UPF3A-201ENST00000351487 NIPSNAP2O75323 286 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 CD160O95971 181 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 UROSP10746 265 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 APOFQ13790 326 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 AARS2Q5JTZ9 985 aaKnown RBP21.95■■□□□ 1.1
UPF3A-201ENST00000351487 SYVN1Q86TM6 617 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 TRIM15Q9C019 465 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 AIG1Q9NVV5 245 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 ZNF225Q9UK10 706 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 PADI4Q9UM07 663 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 BACE2Q9Y5Z0 518 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 BRCA2P51587 3418 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 TBKBP1A7MCY6 615 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 OR1I1O60431 355 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 TMCC1O94876 653 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 CYBBP04839 570 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 SLC6A2P23975 617 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 GRIA3P42263 894 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 RCAN2Q14206 197 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 RPS6KA2Q15349 733 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 TCTN1Q2MV58 587 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 RNF219Q5W0B1 726 aaPredicted RBP21.95■■□□□ 1.1
UPF3A-201ENST00000351487 LCN8Q6JVE9 175 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 ZNF783Q6ZMS7 281 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 ANKFN1Q8N957 763 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 SIDT2Q8NBJ9 832 aaKnown RBP21.95■■□□□ 1.1
UPF3A-201ENST00000351487 LRRC58Q96CX6 371 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 MYRFLQ96LU7 910 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 GKN1Q9NS71 199 aa21.95■■□□□ 1.1
UPF3A-201ENST00000351487 CCM2LQ9NUG4 571 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms