RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HTRA2O43464 458 aaPredicted RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 GLP2RO95838 553 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SLC10A3P09131 477 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 ITGB6P18564 788 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 HRH2P25021 359 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 GDF5P43026 501 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 YAP1P46937 504 aaKnown RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 ERVPABLB-1P60509 514 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 NKX3-2P78367 333 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CLCQ05315 142 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 IL10RBQ08334 325 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 TRAF2Q12933 501 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 PPP1R8Q12972 351 aaKnown RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 TYSND1Q2T9J0 566 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 ATXN7L2Q5T6C5 722 aaPredicted RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 MAP3K21Q5TCX8 1036 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CXorf57Q6NSI4 855 aaKnown RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 LETMD1Q6P1Q0 360 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SLC2A7Q6PXP3 512 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 RFLNAQ6ZTI6 216 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 KIAA0408Q6ZU52 694 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SLC24A5Q71RS6 500 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 IFNEQ86WN2 208 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 RALGPS2Q86X27 583 aaPredicted RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 DDIASQ8IXT1 998 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SLC22A15Q8IZD6 547 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 NAT16Q8N8M0 369 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 MPP4Q96JB8 637 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SPON2Q9BUD6 331 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 IKZF5Q9H5V7 419 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SPAG4Q9NPE6 437 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SMOXQ9NWM0 555 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 ELOVL2Q9NXB9 296 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 PLXNB3Q9ULL4 1909 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 E2F3O00716 465 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 RPP40O75818 363 aaKnown RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 PRR35P0CG20 571 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 IRF1P10914 325 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CTPS1P17812 591 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CLCN2P51788 898 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 IRX1P78414 480 aaPredicted RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 NFKB2Q00653 900 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 NKG7Q16617 165 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 USP41Q3LFD5 358 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 HABP4Q5JVS0 413 aaKnown RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 MBOAT1Q6ZNC8 495 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 TMEM150AQ86TG1 271 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 ZSWIM9Q86XI8 627 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 OFCC1Q8IZS5 231 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CLDN19Q8N6F1 224 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CD200R1Q8TD46 325 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 BRSK1Q8TDC3 778 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 ADAMTS19Q8TE59 1207 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 SOCS4Q8WXH5 440 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 TMEM125Q96AQ2 219 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 EME1Q96AY2 570 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 VWCEQ96DN2 955 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 TSNARE1Q96NA8 513 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 UHRF1Q96T88 793 aaPredicted RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 SPOCK3Q9BQ16 436 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 PRKD2Q9BZL6 878 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 CATSPERZQ9NTU4 200 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 ABCD2Q9UBJ2 740 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 EIF2B4Q9UI10 523 aaKnown RBP6□□□□□ -1.45
CLCN3-201ENST00000347613 RAB26Q9ULW5 256 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 PCDHB5Q9Y5E4 795 aa6□□□□□ -1.45
CLCN3-201ENST00000347613 OBSL1O75147 1896 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SLCO1B7G3V0H7 640 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 AZIN1O14977 448 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SLC22A2O15244 555 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SMAD6O43541 496 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 OR4F21O95013 312 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CLPTM1O96005 669 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 FGF4P08620 206 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 HMGA1P17096 107 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 PAMP19021 973 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 POLD2P49005 469 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF135P52742 658 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 DGKQP52824 942 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 IST1P53990 364 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 XIAPP98170 497 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 PTPRNQ16849 979 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 LHX8Q68G74 356 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 FAM45BPQ6NSW5 357 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ADGRG5Q8IZF4 528 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 HS3ST5Q8IZT8 346 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CLYBLQ8N0X4 340 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 CBR4Q8N4T8 237 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 ADCY4Q8NFM4 1077 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 GPR150Q8NGU9 434 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 FAM45AQ8TCE6 357 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 PROKR1Q8TCW9 393 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 LRRC58Q96CX6 371 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SCLYQ96I15 445 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 MGME1Q9BQP7 344 aa5.99□□□□□ -1.45
CLCN3-201ENST00000347613 NAA50Q9GZZ1 169 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 RPF2Q9H7B2 306 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 SPATS2LQ9NUQ6 558 aaKnown RBP5.99□□□□□ -1.45
CLCN3-201ENST00000347613 NLE1Q9NVX2 485 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms