RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 GRASPQ7Z6J2 395 aaPredicted RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 PCYOX1LQ8NBM8 494 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 LPGAT1Q92604 370 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 PTCD3Q96EY7 689 aaKnown RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 SLC30A3Q99726 388 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 SLC8A2Q9UPR5 921 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 TBC1D3BA6NDS4 549 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 LDB2O43679 373 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 SNRPB2P08579 225 aaKnown RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 ZNF7P17097 686 aaPredicted RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 ARNTP27540 789 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 CD70P32970 193 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 GCNT7Q6ZNI0 430 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ZBTB49Q6ZSB9 765 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 DHDDSQ86SQ9 333 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 KREMEN2Q8NCW0 462 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ZNF398Q8TD17 642 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ELMO1Q92556 727 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 GORASP1Q9BQQ3 440 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 KLHL4Q9C0H6 718 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 DRC3Q9H069 523 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 SSU72Q9NP77 194 aaKnown RBP13.22□□□□□ -0.29
CASC4-202ENST00000345795 CCL26Q9Y258 94 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 A0A087X1B8 175 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 PSEN1P49768 467 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 NDST2P52849 883 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 CHRNA6Q15825 494 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 UGT3A1Q6NUS8 523 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 FAM124AQ86V42 546 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 LRTOMTQ8WZ04 291 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 ING2Q9H160 280 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 BCAP29Q9UHQ4 241 aa13.22□□□□□ -0.29
CASC4-202ENST00000345795 PLCL1Q15111 1095 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 SKIV2LQ15477 1246 aaKnown RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 BHLHA9Q7RTU4 235 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 FBXW8Q8N3Y1 598 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 RNF175Q8N4F7 328 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 C3orf30Q96M34 536 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 MTERF1Q99551 399 aaKnown RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 IPPKQ9H8X2 491 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 FETUBQ9UGM5 382 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 CCDC154A6NI56 674 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 S1PR4O95977 384 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 RPL10P27635 214 aaKnown RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 SERPINA4P29622 427 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 SKIV2L2P42285 1042 aaKnown RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 SULT2A1Q06520 285 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 SEMA3BQ13214 749 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 LAPTM4AQ15012 233 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 NAIF1Q69YI7 327 aaPredicted RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 CD300LGQ6UXG3 332 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 TMEM25Q86YD3 366 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 ADGRG2Q8IZP9 1017 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 OFCC1Q8IZS5 231 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 MDGA1Q8NFP4 955 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 NRG4Q8WWG1 115 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.29
CASC4-202ENST00000345795 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 SH3BP4Q9P0V3 963 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 MCM8Q9UJA3 840 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 BAG5Q9UL15 447 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 ANKRD6Q9Y2G4 727 aa13.21□□□□□ -0.29
CASC4-202ENST00000345795 GNG14A0A1W2PPG7 69 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 CCDC189A1A4V9 331 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 MATN2O00339 956 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.3
CASC4-202ENST00000345795 FGF18O76093 207 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 IGSF6O95976 241 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 MYOGP15173 224 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 HCAR3P49019 387 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 CDH4P55283 916 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 SH3BP2P78314 561 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 DSC3Q14574 896 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 TEAD2Q15562 447 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 MAGEE2Q8TD90 523 aaPredicted RBP13.21□□□□□ -0.3
CASC4-202ENST00000345795 PARVBQ9HBI1 364 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 DYRK4Q9NR20 520 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 TMEM248Q9NWD8 314 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 INSL5Q9Y5Q6 135 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 PAPPA2Q9BXP8 1791 aa13.21□□□□□ -0.3
CASC4-202ENST00000345795 A0A0G2JN53 185 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 PRAMEF11O60813 436 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 NR4A1P22736 598 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 TM4SF4P48230 202 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 DGKEP52429 567 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 CYP4F2P78329 520 aa13.2□□□□□ -0.3
CASC4-202ENST00000345795 UAP1L1Q3KQV9 507 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms