RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 HACD3Q9P035 362 aa17.89■□□□□ 0.45
USF2-202ENST00000343550 CNOT6Q9ULM6 557 aaKnown RBP17.89■□□□□ 0.45
USF2-202ENST00000343550 DOLKQ9UPQ8 538 aa17.89■□□□□ 0.45
USF2-202ENST00000343550 PTPRQQ9UMZ3 2332 aa17.89■□□□□ 0.45
USF2-202ENST00000343550 TEX51A0A1B0GUA7 166 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 PRB1P04280 392 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 CEACAM5P06731 702 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 CTSEP14091 401 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 MSNP26038 577 aaKnown RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 MSLNQ13421 630 aaPredicted RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 SPARCL1Q14515 664 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 DENND5AQ6IQ26 1287 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 LVRNQ6Q4G3 990 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 IGF2-ASQ6U949 168 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 TTC30BQ8N4P2 665 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 LSM14AQ8ND56 463 aaKnown RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 WDR48Q8TAF3 677 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 BLOC1S5Q8TDH9 187 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 SCG3Q8WXD2 468 aaKnown RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 PDXPQ96GD0 296 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 MS4A14Q96JA4 679 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 SLC46A1Q96NT5 459 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 APOL2Q9BQE5 337 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 CCDC3Q9BQI4 270 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 FRMD8Q9BZ67 464 aaPredicted RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 CDH19Q9H159 772 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 ARNT2Q9HBZ2 717 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 RAD18Q9NS91 495 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 GULP1Q9UBP9 304 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 TTC7AQ9ULT0 858 aaPredicted RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 FADS2P1A8MWK0 482 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 CASC3O15234 703 aaKnown RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 IFNB1P01574 187 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 SLC4A1P02730 911 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 ETS1P14921 441 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 BPIP17213 487 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 RBMS1P29558 406 aaKnown RBP17.88■□□□□ 0.45
USF2-202ENST00000343550 BROXQ5VW32 411 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 PRUNE1Q86TP1 453 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 SDR16C5Q8N3Y7 309 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 ARL10Q8N8L6 244 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 KCNE4Q8WWG9 221 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 COX14Q96I36 57 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 TBL1YQ9BQ87 522 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 CYP4F12Q9HCS2 524 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 BPIFA1Q9NP55 256 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 HOMER3Q9NSC5 361 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 SLC17A4Q9Y2C5 497 aa17.88■□□□□ 0.45
USF2-202ENST00000343550 PRSS38A1L453 326 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 PSMD3O43242 534 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 POLD2P49005 469 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 DCDC1P59894 354 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 C19orf57Q0VDD7 668 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 TCEA2Q15560 299 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 TAB3Q8N5C8 712 aaPredicted RBP17.87■□□□□ 0.45
USF2-202ENST00000343550 PRELID2Q8N945 189 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 GLIS1Q8NBF1 620 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 COG1Q8WTW3 980 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 PRR11Q96HE9 360 aaPredicted RBP17.87■□□□□ 0.45
USF2-202ENST00000343550 OSBPL9Q96SU4 736 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 DPH1Q9BZG8 443 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 IL17CQ9P0M4 197 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 SIRPGQ9P1W8 387 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 NFKBIL1Q9UBC1 381 aaPredicted RBP17.87■□□□□ 0.45
USF2-202ENST00000343550 MOSPD1Q9UJG1 213 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 TMEM98Q9Y2Y6 226 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 PCDHGA8Q9Y5G5 932 aa17.87■□□□□ 0.45
USF2-202ENST00000343550 LRP4O75096 1905 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 INPP4BO15327 924 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 KLK10O43240 276 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 KCNJ1P48048 391 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 UCNP55089 124 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 TMPRSS3P57727 454 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 SPIDRQ14159 915 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 GLT6D1Q7Z4J2 308 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 TRIM74Q86UV6 250 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 GKN2Q86XP6 184 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 BRSK1Q8TDC3 778 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 PTCD2Q8WV60 388 aaKnown RBP17.86■□□□□ 0.45
USF2-202ENST00000343550 SCARF2Q96GP6 870 aaPredicted RBP17.86■□□□□ 0.45
USF2-202ENST00000343550 SPATA16Q9BXB7 569 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 TMEM168Q9H0V1 697 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 ETNK1Q9HBU6 452 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 SNX12Q9UMY4 172 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 GPR34Q9UPC5 381 aa17.86■□□□□ 0.45
USF2-202ENST00000343550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.86■□□□□ 0.45
USF2-202ENST00000343550 BUD23O43709 281 aaKnown RBP17.85■□□□□ 0.45
USF2-202ENST00000343550 AP2A1O95782 977 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 ZSCAN5DPP0CG00 497 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 PDX1P52945 283 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 ALS2CLQ60I27 953 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 TRAM1L1Q8N609 369 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 CCDC89Q8N998 374 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 KYQ8NBH2 561 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 WDR36Q8NI36 951 aaKnown RBP17.85■□□□□ 0.45
USF2-202ENST00000343550 LRRC45Q96CN5 670 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 PLEKHG4BQ96PX9 1271 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 ZSCAN5AQ9BUG6 496 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 SYNDIG1Q9H7V2 258 aa17.85■□□□□ 0.45
USF2-202ENST00000343550 LRRC40Q9H9A6 602 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms