RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 XYLBO75191 536 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 S1PR4O95977 384 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 CD86P42081 329 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 GPR162Q16538 588 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 TRIM16LQ309B1 348 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 R3HCC1LQ7Z5L2 792 aaKnown RBP22.25■■□□□ 1.15
TRIM28-202ENST00000341753 TBC1D21Q8IYX1 336 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 CALML6Q8TD86 181 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 SENP8Q96LD8 212 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 PRKD2Q9BZL6 878 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 NT5MQ9NPB1 228 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 TMEM9Q9P0T7 183 aa22.25■■□□□ 1.15
TRIM28-202ENST00000341753 TOR1BO14657 336 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 CRCPO75575 148 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 SEC14L2O76054 403 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 CD1DP15813 335 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 CLCNKBP51801 687 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 IST1P53990 364 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 TMBIM6P55061 237 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 KCNK10P57789 538 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 MORN1Q5T089 497 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 COLGALT2Q8IYK4 626 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 CLEC4FQ8N1N0 589 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 SFRP1Q8N474 314 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 DCBLD1Q8N8Z6 715 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 DAPK2Q9UIK4 370 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 CASTOR2A6NHX0 329 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 HHLA1C9JL84 531 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 GABRDO14764 452 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 PRDX3P30048 256 aaKnown RBP22.24■■□□□ 1.15
TRIM28-202ENST00000341753 SERPINH1P50454 418 aaKnown RBP22.24■■□□□ 1.15
TRIM28-202ENST00000341753 PLA2G16P53816 162 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 SPIDRQ14159 915 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 XKR4Q5GH76 650 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 BROXQ5VW32 411 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 KANK2Q63ZY3 851 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 ANKRD34AQ69YU3 496 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 STK32CQ86UX6 486 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 TAMM41Q96BW9 452 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 PSME2Q9UL46 239 aa22.24■■□□□ 1.15
TRIM28-202ENST00000341753 AXIN1O15169 862 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 PAGE1O75459 146 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 C1RP00736 705 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 AQP6Q13520 282 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 IHHQ14623 411 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 SLC14A2Q15849 920 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 ZNF549Q6P9A3 640 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 NTN4Q9HB63 628 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 PCDHGA11Q9Y5H2 935 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 GPR45Q9Y5Y3 372 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 A0A1W2PP18 115 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 NCF1BA6NI72 391 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-202ENST00000341753 NCF1CA8MVU1 366 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-202ENST00000341753 HAS3O00219 553 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 MAN1A2O60476 641 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 C7P10643 843 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 MTHFD2P13995 350 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 NCF1P14598 390 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-202ENST00000341753 CRYBB1P53674 252 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-202ENST00000341753 RAB41Q5JT25 222 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 SCAMP5Q8TAC9 235 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 TUBA1CQ9BQE3 449 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 TRIM54Q9BYV2 358 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 CCDC68Q9H2F9 335 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 RAD21L1Q9H4I0 556 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 SLC30A1Q9Y6M5 507 aa22.23■■□□□ 1.15
TRIM28-202ENST00000341753 KRBA1A5PL33 1030 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 EEF1DP29692 281 aaKnown RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 PGFP49763 221 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 PPP1R8Q12972 351 aaKnown RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 KDELC1Q6UW63 502 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 ABHD11Q8NFV4 315 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 HASPINQ8TF76 798 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 SLC22A17Q8WUG5 538 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 TMBIM1Q969X1 311 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 TSPYL2Q9H2G4 693 aaPredicted RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 PDCD11Q14690 1871 aaKnown RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 GJB3O75712 270 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 CNTN5O94779 1100 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 MATN4O95460 622 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 ESRRBO95718 433 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 PRSS56P0CW18 603 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 CCR1P32246 355 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 TMED10P49755 219 aaKnown RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 RAD23AP54725 363 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 ARSFP54793 590 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 RAB15P59190 212 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 CDC42EP1Q00587 391 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 DSC2Q02487 901 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 FSCN1Q16658 493 aaKnown RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 SLC2A7Q6PXP3 512 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 HS3ST5Q8IZT8 346 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 ESAMQ96AP7 390 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 FCRL2Q96LA5 508 aaPredicted RBP22.22■■□□□ 1.15
TRIM28-202ENST00000341753 TBATAQ96M53 351 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 ACOX2Q99424 681 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 HEPHQ9BQS7 1158 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 AP5M1Q9H0R1 490 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 EXD2Q9NVH0 621 aa22.22■■□□□ 1.15
TRIM28-202ENST00000341753 TMEM247A6NEH6 219 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms