RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 WISP2O76076 250 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 FUCA1P04066 466 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 CTSBP07858 339 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 ASPAP45381 313 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 MAPK9P45984 424 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 CCNHP51946 323 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 NKX6-1P78426 367 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 GTF3C1Q12789 2109 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 ILF3Q12906 894 aaKnown RBP eCLIP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 MTM1Q13496 603 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 CDPF1Q6NVV7 123 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 SYCP3Q8IZU3 236 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 CLEC1AQ8NC01 280 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 C2CD4AQ8NCU7 369 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 SLC37A2Q8TED4 501 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 MR1Q95460 341 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 SDCCAG3Q96C92 435 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 C9orf72Q96LT7 481 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 MAGEB10Q96LZ2 347 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 LGR4Q9BXB1 951 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 FGFBP2Q9BYJ0 223 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 CARS2Q9HA77 564 aaKnown RBP11.01□□□□□ -0.65
ATXN3-201ENST00000340660 BLOC1S4Q9NUP1 217 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 TBC1D7Q9P0N9 293 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 SEC14L3Q9UDX4 400 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 EDARQ9UNE0 448 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 ANKRD36A6QL64 1941 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 HCFC1P51610 2035 aa11.01□□□□□ -0.65
ATXN3-201ENST00000340660 TRBV23OR9-2A0A075B6M9 112 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 THAP12O43422 761 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 KLHL41O60662 606 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 C9P02748 559 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 RAF1P04049 648 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 F13BP05160 661 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 HOXD4P09016 255 aaPredicted RBP11□□□□□ -0.65
ATXN3-201ENST00000340660 GJB2P29033 226 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 ARCN1P48444 511 aaKnown RBP11□□□□□ -0.65
ATXN3-201ENST00000340660 INCA1Q0VD86 236 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 ADIGQ0VDE8 80 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 GPS2Q13227 327 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 PSMD6Q15008 389 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 ZNF805Q5CZA5 627 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 SHEQ5VZ18 495 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 MRGPREQ86SM8 312 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 ARHGEF26Q96DR7 871 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 PRMT1Q99873 361 aaKnown RBP11□□□□□ -0.65
ATXN3-201ENST00000340660 NT5C1AQ9BXI3 368 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 MRPL44Q9H9J2 332 aaKnown RBP11□□□□□ -0.65
ATXN3-201ENST00000340660 SLC30A1Q9Y6M5 507 aa11□□□□□ -0.65
ATXN3-201ENST00000340660 F5H5T6 163 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 CACNB4O00305 520 aaPredicted RBP10.99□□□□□ -0.65
ATXN3-201ENST00000340660 ZNF202O95125 648 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 VNN1O95497 513 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 TPOP07202 933 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 RAB40ALP0C0E4 278 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 SOX8P57073 446 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 NUCB2P80303 420 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 RBPJQ06330 500 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 CDC20BQ86Y33 519 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 SHISA5Q8N114 240 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 CATSPER1Q8NEC5 780 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 OR6K2Q8NGY2 324 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 CDK5RAP3Q96JB5 506 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 PPP1R9BQ96SB3 815 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 NDC1Q9BTX1 674 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 STMN3Q9NZ72 180 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 IL17CQ9P0M4 197 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 TRRAPQ9Y4A5 3859 aa10.99□□□□□ -0.65
ATXN3-201ENST00000340660 BIRC6Q9NR09 4857 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 FAM95CA0A1B0GW59 222 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 NKX2-6A6NCS4 301 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 TRIM49BA6NDI0 452 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 KIAA0391O15091 583 aaKnown RBP10.98□□□□□ -0.65
ATXN3-201ENST00000340660 EIF4EBP3O60516 100 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-201ENST00000340660 GCNT3O95395 438 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 CAPN1P07384 714 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 CYP24A1Q07973 514 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 NFATC2Q13469 925 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 SYCP1Q15431 976 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
ATXN3-201ENST00000340660 CARD16Q5EG05 197 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 TMCO4Q5TGY1 634 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 SPOPLQ6IQ16 392 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 DTHD1Q6ZMT9 781 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 FBLIM1Q8WUP2 373 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 FER1L6-AS2Q96M78 137 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 IPO9Q96P70 1041 aaKnown RBP10.98□□□□□ -0.65
ATXN3-201ENST00000340660 GBP5Q96PP8 586 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 NLNQ9BYT8 704 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 RASSF1Q9NS23 344 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 TRNAU1APQ9NX07 287 aaKnown RBP10.98□□□□□ -0.65
ATXN3-201ENST00000340660 TLR6Q9Y2C9 796 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 HS3ST4Q9Y661 456 aa10.98□□□□□ -0.65
ATXN3-201ENST00000340660 FAM237BA0A1B0GVD1 139 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 SOCS6O14544 535 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 EIF3DO15371 548 aaKnown RBP eCLIP10.97□□□□□ -0.65
ATXN3-201ENST00000340660 NDUFB5O43674 189 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 UGT2B4P06133 528 aa10.97□□□□□ -0.65
ATXN3-201ENST00000340660 UGT1A4P22310 534 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms