RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CERCAMQ5T4B2 595 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 GALNT13Q8IUC8 556 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 SCG3Q8WXD2 468 aaKnown RBP15.1■□□□□ 0.01
UBE3B-201ENST00000340074 BOCQ9BWV1 1114 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 DDX47Q9H0S4 455 aaKnown RBP15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A7Q9HAW7 530 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A10Q9HAW8 530 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A8Q9HAW9 530 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 TRNAU1APQ9NX07 287 aaKnown RBP15.1■□□□□ 0.01
UBE3B-201ENST00000340074 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 APOBEC2Q9Y235 224 aaKnown RBP15.1■□□□□ 0.01
UBE3B-201ENST00000340074 PRKAB1Q9Y478 270 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 PLEKHM1Q9Y4G2 1056 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 ST14Q9Y5Y6 855 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 LY6G6EA0A0G2JKS1 128 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 TCRBV7S3A2A0A539 114 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 CCL22O00626 93 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 MTX2O75431 263 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 SRP72O76094 671 aaKnown RBP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GAS8O95995 478 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ZNF8P17098 575 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 AK4P27144 223 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 CASQ1P31415 396 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 HADHAP40939 763 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ACADVLP49748 655 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 DAB2P98082 770 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 PEX6Q13608 980 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ITGA9Q13797 1035 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 LVRNQ6Q4G3 990 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 SYT10Q6XYQ8 523 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ADGRG6Q86SQ4 1221 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 NRROSQ86YC3 692 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 FAM46DQ8NEK8 389 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GDAP1Q8TB36 358 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ZNF398Q8TD17 642 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GPBAR1Q8TDU6 330 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GRK7Q8WTQ7 553 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 DNAJC1Q96KC8 554 aaKnown RBP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 OR2M4Q96R27 311 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 C19orf43Q9BQ61 176 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 OR2AG1Q9H205 316 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 NLE1Q9NVX2 485 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 SIRPGQ9P1W8 387 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 APPL1Q9UKG1 709 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 U3KQA8 63 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 CCDC78A2IDD5 438 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 MROH6A6NGR9 719 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 NUAK1O60285 661 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 DKK1O94907 266 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ECEL1O95672 775 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 CKMT1AP12532 417 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 TPSB2P20231 275 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ACP1P24666 158 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 XIAPP98170 497 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 CTBSQ01459 385 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ILF3Q12906 894 aaKnown RBP eCLIP15.09■□□□□ 0.01
UBE3B-201ENST00000340074 FOXC1Q12948 553 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 TPSAB1Q15661 275 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 SLC30A9Q6PML9 568 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 MICALCLQ6ZW33 695 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 SLC35F3Q8IY50 421 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 STYXQ8WUJ0 223 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GSDMCQ9BYG8 508 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 ASB8Q9H765 288 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 RMI1Q9H9A7 625 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 SMOXQ9NWM0 555 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GPR34Q9UPC5 381 aa15.09■□□□□ 0.01
UBE3B-201ENST00000340074 GPR89AB7ZAQ6 455 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 GRID2O43424 1007 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 VEGFDO43915 354 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 RFPL3O75679 317 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 TOP3BO95985 862 aaKnown RBP15.08■□□□□ 0
UBE3B-201ENST00000340074 GPR89BP0CG08 455 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 MC4RP32245 332 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 PAFAH1B1P43034 410 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 SESN2P58004 480 aaPredicted RBP15.08■□□□□ 0
UBE3B-201ENST00000340074 TMEM115Q12893 351 aaPredicted RBP15.08■□□□□ 0
UBE3B-201ENST00000340074 NFATC2Q13469 925 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 KCNJ11Q14654 390 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 PPP1R7Q15435 360 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 NR0B2Q15466 257 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 GPRC6AQ5T6X5 926 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 CHST15Q7LFX5 561 aaPredicted RBP15.08■□□□□ 0
UBE3B-201ENST00000340074 SFTPA2Q8IWL1 248 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 KYQ8NBH2 561 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 ADAMTS14Q8WXS8 1223 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 CDKN2AIPNLQ96HQ2 116 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 RANBP9Q96S59 729 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 DPEP2Q9H4A9 486 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 SPATS2LQ9NUQ6 558 aaKnown RBP15.08■□□□□ 0
UBE3B-201ENST00000340074 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
UBE3B-201ENST00000340074 TAAR2Q9P1P5 351 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 GULP1Q9UBP9 304 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 RNF14Q9UBS8 474 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 PCDHGA1Q9Y5H4 931 aa15.08■□□□□ 0
UBE3B-201ENST00000340074 WDFY3Q8IZQ1 3526 aa15.07■□□□□ 0
UBE3B-201ENST00000340074 UNC13CQ8NB66 2214 aa15.07■□□□□ 0
UBE3B-201ENST00000340074 HEATR9A2RTY3 570 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms