RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 KYNUQ16719 465 aa21.98■■□□□ 1.11
SDC3-202ENST00000339394 NEPROQ6NW34 567 aa21.98■■□□□ 1.11
SDC3-202ENST00000339394 TRMT10BQ6PF06 316 aaKnown RBP21.98■■□□□ 1.11
SDC3-202ENST00000339394 TAS2R42Q7RTR8 314 aa21.98■■□□□ 1.11
SDC3-202ENST00000339394 PHYKPLQ8IUZ5 450 aa21.98■■□□□ 1.11
SDC3-202ENST00000339394 GSDMBQ8TAX9 411 aa21.98■■□□□ 1.11
SDC3-202ENST00000339394 CATSPERZQ9NTU4 200 aa21.98■■□□□ 1.11
SDC3-202ENST00000339394 MARCH4Q9P2E8 410 aaPredicted RBP21.98■■□□□ 1.11
SDC3-202ENST00000339394 FANCMQ8IYD8 2048 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 ERVK-10P10266 1014 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 MPLP40238 635 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 THOP1P52888 689 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 NFATC4Q14934 902 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 TEAD4Q15561 434 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 HSP90AA5PQ58FG0 334 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 GPRC6AQ5T6X5 926 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 KCNMB4Q86W47 210 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 SERPINA9Q86WD7 417 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 NXPE1Q8N323 547 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 CEP76Q8TAP6 659 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 GDAP1Q8TB36 358 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 SKA1Q96BD8 255 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 ULK4Q96C45 1275 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 CERS2Q96G23 380 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 CDC42EP4Q9H3Q1 356 aaKnown RBP21.97■■□□□ 1.11
SDC3-202ENST00000339394 MOCS1Q9NZB8 636 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 RAB21Q9UL25 225 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 OAS3Q9Y6K5 1087 aaKnown RBP21.97■■□□□ 1.11
SDC3-202ENST00000339394 GPR179Q6PRD1 2367 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 SCN8AQ9UQD0 1980 aa21.97■■□□□ 1.11
SDC3-202ENST00000339394 WDR87Q6ZQQ6 2873 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 TMEM202A6NGA9 273 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 MTX2O75431 263 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 TUBBP07437 444 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 ACRV1P26436 265 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 HTR1BP28222 390 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 KIAA1024LP59773 190 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 THOC5Q13769 683 aaKnown RBP21.96■■□□□ 1.11
SDC3-202ENST00000339394 FRG1Q14331 258 aaKnown RBP21.96■■□□□ 1.11
SDC3-202ENST00000339394 SEMA3AQ14563 771 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 DUOXA1Q1HG43 343 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 ZNF648Q5T619 568 aaPredicted RBP21.96■■□□□ 1.11
SDC3-202ENST00000339394 RABEPKQ7Z6M1 372 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 LDB1Q86U70 411 aaPredicted RBP21.96■■□□□ 1.11
SDC3-202ENST00000339394 DCP2Q8IU60 420 aaKnown RBP21.96■■□□□ 1.11
SDC3-202ENST00000339394 DDHD1Q8NEL9 900 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 PPANQ9NQ55 473 aaKnown RBP21.96■■□□□ 1.11
SDC3-202ENST00000339394 NINJ2Q9NZG7 142 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 TMEM98Q9Y2Y6 226 aa21.96■■□□□ 1.11
SDC3-202ENST00000339394 SPTY2D1-AS1A0A0U1RR47 76 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 A0A1B0GVT2 93 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 PATE3B3GLJ2 98 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 MAGEC1O60732 1142 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 LMNAP02545 664 aaKnown RBP21.95■■□□□ 1.11
SDC3-202ENST00000339394 RETP07949 1114 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 C21orf59P57076 290 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 NXPH1P58417 271 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 PTK2BQ14289 1009 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 CCDC6Q16204 474 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 KHDC1Q4VXA5 237 aaKnown RBP21.95■■□□□ 1.11
SDC3-202ENST00000339394 LDLRAP1Q5SW96 308 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 MRNIPQ6NTE8 343 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 GPR150Q8NGU9 434 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.95■■□□□ 1.11
SDC3-202ENST00000339394 TXLNGYQ9BZA5 131 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 TRIM39Q9HCM9 518 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 ANKRD6Q9Y2G4 727 aa21.95■■□□□ 1.11
SDC3-202ENST00000339394 PLXNA2O75051 1894 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 TCRBV9S1A1TA0A576 114 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 CFIP05156 583 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 GSTA2P09210 222 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 POLD2P49005 469 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 DBN1Q16643 649 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 TRIM61Q5EBN2 209 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 AARS2Q5JTZ9 985 aaKnown RBP21.95■■□□□ 1.1
SDC3-202ENST00000339394 UBAP2Q5T6F2 1119 aaKnown RBP21.95■■□□□ 1.1
SDC3-202ENST00000339394 SLC23A3Q6PIS1 610 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 ENPP7Q6UWV6 458 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 CERS6Q6ZMG9 384 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 MACC1Q6ZN28 852 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 CYS1Q717R9 158 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 SPATS2Q86XZ4 545 aaKnown RBP21.95■■□□□ 1.1
SDC3-202ENST00000339394 CILP2Q8IUL8 1156 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 OTUD6BQ8N6M0 293 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 TTC25Q96NG3 672 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 COPS8Q99627 209 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 VPS37BQ9H9H4 285 aa21.95■■□□□ 1.1
SDC3-202ENST00000339394 IARS2Q9NSE4 1012 aaKnown RBP21.95■■□□□ 1.1
SDC3-202ENST00000339394 SPAG17Q6Q759 2223 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 CEP192Q8TEP8 1941 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 CEACAM5P06731 702 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 KELP23276 732 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 TMEM115Q12893 351 aaPredicted RBP21.94■■□□□ 1.1
SDC3-202ENST00000339394 FZD2Q14332 565 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 KIF19Q2TAC6 998 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 PLA2G2CQ5R387 149 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 ZNF470Q6ECI4 717 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 DOK6Q6PKX4 331 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 ADGRG6Q86SQ4 1221 aa21.94■■□□□ 1.1
SDC3-202ENST00000339394 SDCCAG8Q86SQ7 713 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms