RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 SF3A3Q12874 501 aaKnown RBP eCLIP8.4□□□□□ -1.06
PACRG-201ENST00000337019 BLMHQ13867 455 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 FGL2Q14314 439 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 TFDP3Q5H9I0 405 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 HHATQ5VTY9 493 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 KAZNQ674X7 775 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 CENPUQ71F23 418 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 DPPA4Q7L190 304 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 KIF2BQ8N4N8 673 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 PQLC3Q8N755 202 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 ENDOVQ8N8Q3 282 aaKnown RBP8.4□□□□□ -1.06
PACRG-201ENST00000337019 SAP25Q8TEE9 199 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 FATE1Q969F0 183 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 ALKBH8Q96BT7 664 aaKnown RBP8.4□□□□□ -1.06
PACRG-201ENST00000337019 ECHDC3Q96DC8 303 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 C9orf72Q96LT7 481 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 ZNF570Q96NI8 536 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 HERPUD2Q9BSE4 406 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 DUSP23Q9BVJ7 150 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 SLC13A1Q9BZW2 595 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 RNPEPL1Q9HAU8 725 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 MLXIPLQ9NP71 852 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 PSMC3IPQ9P2W1 217 aaPredicted RBP8.4□□□□□ -1.06
PACRG-201ENST00000337019 SPASTQ9UBP0 616 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 B4GALT6Q9UBX8 382 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 APOBEC3BQ9UH17 382 aaKnown RBP8.4□□□□□ -1.06
PACRG-201ENST00000337019 TBK1Q9UHD2 729 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 LNPEPQ9UIQ6 1025 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 CORO1CQ9ULV4 474 aaPredicted RBP8.4□□□□□ -1.06
PACRG-201ENST00000337019 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 BTBD3Q9Y2F9 522 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 RAI2Q9Y5P3 530 aa8.4□□□□□ -1.06
PACRG-201ENST00000337019 CHD5Q8TDI0 1954 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 ADAMTS9Q9P2N4 1935 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 PLXNA2O75051 1894 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 WDR87Q6ZQQ6 2873 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 MTSS1O43312 755 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 HTRA2O43464 458 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 RECQL5O94762 991 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 PGLSO95336 258 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 TROVE2P10155 538 aaKnown RBP eCLIP8.4□□□□□ -1.07
PACRG-201ENST00000337019 CDK4P11802 303 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 JUNDP17535 347 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 KRT15P19012 456 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 CR2P20023 1033 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 NR2C2P49116 596 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 VPS41P49754 854 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 DUSP3P51452 185 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 IRX1P78414 480 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 DSC2Q02487 901 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 PPIDQ08752 370 aaKnown RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 TRAF2Q12933 501 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 BNIP3Q12983 259 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 MTM1Q13496 603 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 TAF11Q15544 211 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 ANKRD20A2Q5SQ80 823 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 FAXCQ5TGI0 409 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 ANKRD20A1Q5TYW2 823 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 ANKRD20A3Q5VUR7 823 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 SLC9A4Q6AI14 798 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 SPOCD1Q6ZMY3 1216 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 MACC1Q6ZN28 852 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 DBX2Q6ZNG2 339 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 PGBD5Q8N414 524 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 TEX26Q8N6G2 289 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 PLD5Q8N7P1 536 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 TP53I13Q8NBR0 393 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 BAHD1Q8TBE0 780 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 C10orf82Q8WW14 230 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 GLMNQ92990 594 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 ERP27Q96DN0 273 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 NUS1Q96E22 293 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 BMFQ96LC9 184 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 KLF6Q99612 283 aaPredicted RBP8.4□□□□□ -1.07
PACRG-201ENST00000337019 IL12RB2Q99665 862 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 HEMGNQ9BXL5 484 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 ADGRE3Q9BY15 652 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 WDR26Q9H7D7 661 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 PCDH9Q9HC56 1237 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 KLQ9UEF7 1012 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 CHKBQ9Y259 395 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 EFR3BQ9Y2G0 817 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 LRRC42Q9Y546 428 aa8.4□□□□□ -1.07
PACRG-201ENST00000337019 CACNA1EQ15878 2313 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 A8MX80 341 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 KCNK1O00180 336 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PSMD11O00231 422 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 TM9SF1O15321 606 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 AQP9O43315 295 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 TYROBPO43914 113 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 CST8O60676 142 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 RFPL3O75679 317 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PIAS2O75928 621 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 SMNDC1O75940 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
PACRG-201ENST00000337019 RASGRP1O95267 797 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PEX11BO96011 259 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 JCHAINP01591 159 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 CSF2P04141 144 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms