RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CLDN11O75508 207 aa8.79□□□□□ -1
SNCA-201ENST00000336904 PAPSS2O95340 614 aaPredicted RBP8.79□□□□□ -1
SNCA-201ENST00000336904 CR2P20023 1033 aa8.79□□□□□ -1
SNCA-201ENST00000336904 LPOP22079 712 aaPredicted RBP8.79□□□□□ -1
SNCA-201ENST00000336904 ME2P23368 584 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ZRSR2Q15696 482 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 UGT3A2Q3SY77 523 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ZNF697Q5TEC3 545 aa8.79□□□□□ -1
SNCA-201ENST00000336904 SYVN1Q86TM6 617 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ZSWIM9Q86XI8 627 aa8.79□□□□□ -1
SNCA-201ENST00000336904 PDSS2Q86YH6 399 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ZFRQ96KR1 1074 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 TMEM74Q96NL1 305 aa8.79□□□□□ -1
SNCA-201ENST00000336904 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 MEAF6Q9HAF1 191 aa8.79□□□□□ -1
SNCA-201ENST00000336904 CFAP97Q9P2B7 532 aa8.79□□□□□ -1
SNCA-201ENST00000336904 COL4A6Q14031 1691 aa8.78□□□□□ -1
SNCA-201ENST00000336904 AZIN1O14977 448 aa8.78□□□□□ -1
SNCA-201ENST00000336904 FKTNO75072 461 aa8.78□□□□□ -1
SNCA-201ENST00000336904 TIPRLO75663 272 aa8.78□□□□□ -1
SNCA-201ENST00000336904 WISP3O95389 354 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 F11P03951 625 aa8.78□□□□□ -1
SNCA-201ENST00000336904 MTHFD1P11586 935 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 CCNHP51946 323 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 DNAJB13P59910 316 aa8.78□□□□□ -1
SNCA-201ENST00000336904 RPS6KA2Q15349 733 aa8.78□□□□□ -1
SNCA-201ENST00000336904 RABL3Q5HYI8 236 aa8.78□□□□□ -1
SNCA-201ENST00000336904 IYDQ6PHW0 289 aa8.78□□□□□ -1
SNCA-201ENST00000336904 LARP4Q71RC2 724 aaKnown RBP eCLIP8.78□□□□□ -1
SNCA-201ENST00000336904 GAREM2Q75VX8 874 aa8.78□□□□□ -1
SNCA-201ENST00000336904 ADGRG2Q8IZP9 1017 aa8.78□□□□□ -1
SNCA-201ENST00000336904 PGAM4Q8N0Y7 254 aa8.78□□□□□ -1
SNCA-201ENST00000336904 PQLC1Q8N2U9 271 aa8.78□□□□□ -1
SNCA-201ENST00000336904 NAT16Q8N8M0 369 aa8.78□□□□□ -1
SNCA-201ENST00000336904 SLAIN1Q8ND83 568 aa8.78□□□□□ -1
SNCA-201ENST00000336904 OR2T11Q8NH01 316 aa8.78□□□□□ -1
SNCA-201ENST00000336904 PIP4K2CQ8TBX8 421 aa8.78□□□□□ -1
SNCA-201ENST00000336904 SORCS1Q8WY21 1168 aa8.78□□□□□ -1
SNCA-201ENST00000336904 PPWD1Q96BP3 646 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 DCUN1D1Q96GG9 259 aa8.78□□□□□ -1
SNCA-201ENST00000336904 MAELQ96JY0 434 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 LRGUKQ96M69 825 aa8.78□□□□□ -1
SNCA-201ENST00000336904 TTLL2Q9BWV7 592 aa8.78□□□□□ -1
SNCA-201ENST00000336904 KLF16Q9BXK1 252 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 MRPL9Q9BYD2 267 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 ELAC1Q9H777 363 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 LHX3Q9UBR4 397 aa8.78□□□□□ -1
SNCA-201ENST00000336904 TRMT6Q9UJA5 497 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 AURKCQ9UQB9 309 aa8.78□□□□□ -1
SNCA-201ENST00000336904 DTNAQ9Y4J8 743 aa8.78□□□□□ -1
SNCA-201ENST00000336904 SNX13Q9Y5W8 968 aa8.78□□□□□ -1
SNCA-201ENST00000336904 PIKFYVEQ9Y2I7 2098 aa8.78□□□□□ -1
SNCA-201ENST00000336904 A0A1W2PQ67 120 aa8.78□□□□□ -1
SNCA-201ENST00000336904 ZBBXA8MT70 800 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CCL16O15467 120 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CAPN15O75808 1086 aa8.78□□□□□ -1
SNCA-201ENST00000336904 PRAMEF1O95521 474 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CCL5P13501 91 aa8.78□□□□□ -1
SNCA-201ENST00000336904 ATP6V1B1P15313 513 aa8.78□□□□□ -1
SNCA-201ENST00000336904 GRIA3P42263 894 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CDKL1Q00532 357 aa8.78□□□□□ -1
SNCA-201ENST00000336904 RAD51Q06609 339 aa8.78□□□□□ -1
SNCA-201ENST00000336904 ELAVL2Q12926 359 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 TLR1Q15399 786 aa8.78□□□□□ -1
SNCA-201ENST00000336904 MTX3Q5HYI7 312 aa8.78□□□□□ -1
SNCA-201ENST00000336904 DNAJC14Q6Y2X3 702 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 CCDC117Q8IWD4 279 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 CPSF7Q8N684 471 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 RIN3Q8TB24 985 aa8.78□□□□□ -1
SNCA-201ENST00000336904 GRIN3AQ8TCU5 1115 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CD200R1Q8TD46 325 aa8.78□□□□□ -1
SNCA-201ENST00000336904 SKA2Q8WVK7 121 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 CORO1BQ9BR76 489 aa8.78□□□□□ -1
SNCA-201ENST00000336904 HGH1Q9BTY7 390 aa8.78□□□□□ -1
SNCA-201ENST00000336904 TMEM39AQ9NV64 488 aa8.78□□□□□ -1
SNCA-201ENST00000336904 SCOCQ9UIL1 159 aa8.78□□□□□ -1
SNCA-201ENST00000336904 TRIOO75962 3097 aa8.78□□□□□ -1
SNCA-201ENST00000336904 A6NHS1 94 aa8.78□□□□□ -1
SNCA-201ENST00000336904 RFPL2O75678 378 aa8.78□□□□□ -1
SNCA-201ENST00000336904 OR6B1O95007 311 aa8.78□□□□□ -1
SNCA-201ENST00000336904 SNRPB2P08579 225 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 PKMP14618 531 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 CKMT2P17540 419 aa8.78□□□□□ -1
SNCA-201ENST00000336904 HSPA7P48741 367 aa8.78□□□□□ -1
SNCA-201ENST00000336904 UFM1P61960 85 aa8.78□□□□□ -1
SNCA-201ENST00000336904 FOLH1Q04609 750 aa8.78□□□□□ -1
SNCA-201ENST00000336904 VEPH1Q14D04 833 aa8.78□□□□□ -1
SNCA-201ENST00000336904 TAF1AQ15573 450 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 TIGD2Q4W5G0 525 aa8.78□□□□□ -1
SNCA-201ENST00000336904 ZNF648Q5T619 568 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 AFTPHQ6ULP2 937 aa8.78□□□□□ -1
SNCA-201ENST00000336904 RAB44Q7Z6P3 723 aaPredicted RBP8.78□□□□□ -1
SNCA-201ENST00000336904 CLHC1Q8NHS4 586 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CIB1Q99828 191 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CCDC28BQ9BUN5 200 aa8.78□□□□□ -1
SNCA-201ENST00000336904 CIPCQ9C0C6 399 aa8.78□□□□□ -1
SNCA-201ENST00000336904 NSUN3Q9H649 340 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 FARSBQ9NSD9 589 aaKnown RBP8.78□□□□□ -1
SNCA-201ENST00000336904 INSL5Q9Y5Q6 135 aa8.78□□□□□ -1
SNCA-201ENST00000336904 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms