RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 NDUFS1P28331 727 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 MAT2AP31153 395 aaKnown RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 LAPTM5Q13571 262 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 PLA2G4EQ3MJ16 856 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 LYSMD3Q7Z3D4 306 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 JADE3Q92613 823 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 IMP4Q96G21 291 aaKnown RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 BBS4Q96RK4 519 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 ARMC7Q9H6L4 198 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 TAGLN3Q9UI15 199 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SCML1Q9UN30 329 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 NPEPPSL1A6NEC2 478 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SRRM3A6NNA2 597 aaPredicted RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CBSLP0DN79 551 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 LBPP18428 481 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CBSP35520 551 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 NFYCQ13952 458 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FASTKQ14296 549 aaKnown RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SPPL3Q8TCT6 385 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CDKN2AIPNLQ96HQ2 116 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 MAGEE1Q9HCI5 957 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 NDOR1Q9UHB4 597 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 LOC100653049A0A140TA62 436 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 OR2AG2A6NM03 316 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 C16orf96A6NNT2 1141 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 MAFKO60675 156 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 KRT34O76011 436 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 TNFP01375 233 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CEBPBP17676 345 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CCDC142Q17RM4 750 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 NELL2Q99435 816 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 TSPAN6O43657 245 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 ERVFC1P60507 584 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 KIAA0319Q5VV43 1072 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SULT1C3Q6IMI6 304 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 EXOC3L1Q86VI1 746 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 RIN3Q8TB24 985 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 TRPC4APQ8TEL6 797 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 VPS50Q96JG6 964 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 IL12RB2Q99665 862 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FAM72CH0Y354 149 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 H3BNC9 293 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SASH3O75995 380 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FKBP9O95302 570 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 VAV1P15498 845 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 RPIAP49247 311 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 PITX1P78337 314 aaPredicted RBP9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 SHHQ15465 462 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FAM72AQ5TYM5 149 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FAM72DQ6L9T8 149 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 ZCCHC23Q6ZST2 131 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FKBP9P1Q75LS8 142 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CMC1Q7Z7K0 106 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 FAM72BQ86X60 149 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 TMEM132CQ8N3T6 1108 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 NRBF2Q96F24 287 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 CCDC138Q96M89 665 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 ZNF556Q9HAH1 456 aa9.25□□□□□ -0.93
FNDC3B-201ENST00000336824 C15orf38-AP3S2A0A0A6YYH1 394 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 TRAFD1O14545 582 aaPredicted RBP9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 TMEM63AO94886 807 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 DAB2P98082 770 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 SF1Q15637 639 aaKnown RBP9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 CCSAPQ6IQ19 270 aaPredicted RBP9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ARPINQ7Z6K5 226 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 LONP2Q86WA8 852 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 IFNEQ86WN2 208 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 SYT11Q9BT88 431 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ABCG4Q9H172 646 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 SLC2A4RGQ9NR83 387 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 HCFC1R1Q9NWW0 138 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 IL1RAPL1Q9NZN1 696 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 TEX264Q9Y6I9 313 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ABLIM3O94929 683 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 NTSR1P30989 418 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 SLC1A2P43004 574 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 CHRNA4P43681 627 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 TTMPQ5BVD1 217 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 LRRC66Q68CR7 880 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 LRRTM4Q86VH4 590 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 HID1Q8IV36 788 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 FGF13Q92913 245 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ATAD3BQ5T9A4 648 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 CHSY3Q70JA7 882 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ERN2Q76MJ5 926 aaKnown RBP9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 SYT12Q8IV01 421 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 HLA-CQ95604 372 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 CAB39LQ9H9S4 337 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 NDUFAF1Q9Y375 327 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 ATF6P18850 670 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 HNMTP50135 292 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 WDR45BQ5MNZ6 344 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 R3HCC1LQ7Z5L2 792 aaKnown RBP9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 CLYBLQ8N0X4 340 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 NXPE3Q969Y0 559 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 MYRFLQ96LU7 910 aa9.24□□□□□ -0.93
FNDC3B-201ENST00000336824 KRCC1Q9NPI7 259 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms