RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DLGAP2Q9P1A6 1054 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 GNEQ9Y223 722 aaKnown RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 POLR3HQ9Y535 204 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 PIPSLA2A3N6 862 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 OR6A2O95222 327 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 FECHP22830 423 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 GRM2Q14416 872 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 IZUMO2Q6UXV1 221 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 OR6Y1Q8NGX8 325 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 AGAP2Q99490 1192 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 TTLL2Q9BWV7 592 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 CDH19Q9H159 772 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 RSPH9Q9H1X1 276 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 VRTNQ9H8Y1 702 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 IL36AQ9UHA7 158 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 PACSIN3Q9UKS6 424 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 TIMM22Q9Y584 194 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 UBXN8O00124 270 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 RFXANKO14593 260 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A9O60656 530 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 TMEM63AO94886 807 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 KRT75O95678 551 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 APOA1P02647 267 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 IDO1P14902 403 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A6P19224 532 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A1P22309 533 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A4P22310 534 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 MPSTP25325 297 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 HNRNPH1P31943 449 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A3P35503 534 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A5P35504 534 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 TAS2R39P59534 338 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 PSME3P61289 254 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 CST9Q5W186 159 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 TRMT10BQ6PF06 316 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ADGRD1Q6QNK2 874 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 CASP12Q6UXS9 341 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 NELL1Q92832 810 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 RAD51AP1Q96B01 352 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A7Q9HAW7 530 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A10Q9HAW8 530 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 UGT1A8Q9HAW9 530 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 MEIS3P2A8K0S8 358 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 RHOP08100 348 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ALPIP09923 528 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 OGNP20774 298 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 GNPDA1P46926 289 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 CCR3P51677 355 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 HK2P52789 917 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 LSM12Q3MHD2 195 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 TIGD2Q4W5G0 525 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 LDLRAP1Q5SW96 308 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 MMADHCQ9H3L0 296 aaPredicted RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 DUSP12Q9UNI6 340 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 CCDC162PA2VCL2 907 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 BLKP51451 505 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF549Q6P9A3 640 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 CLHC1Q8NHS4 586 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 SHDQ96IW2 340 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 WDR55Q9H6Y2 383 aaPredicted RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 REEP1Q9H902 201 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 FNIP2Q9P278 1114 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 TRAFD1O14545 582 aaPredicted RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ZBTB22O15209 634 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 PIK3R1P27986 724 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ACTR1BP42025 376 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ACTR1AP61163 376 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 MRPS22P82650 360 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 WASHC2DQ5SRD0 308 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 IFNLR1Q8IU57 520 aaPredicted RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ZDHHC13Q8IUH4 622 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 SIDT2Q8NBJ9 832 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 NOL11Q9H8H0 719 aaKnown RBP14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF180Q9UJW8 692 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 ANAPC2Q9UJX6 822 aa14.91□□□□□ -0.02
C9orf47-201ENST00000334490 C5P01031 1676 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 URB1O60287 2271 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CNOT3O75175 753 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CNTN5O94779 1100 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 ALAS2P22557 587 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 IFNGR2P38484 337 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CCNHP51946 323 aaPredicted RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 UBAP2LQ14157 1087 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 FAM182AQ5T1J6 154 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 AMZ2Q86W34 360 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 SLC38A3Q99624 504 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 DZANK1Q9NVP4 752 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 NUDT4Q9NZJ9 180 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 POLR1DQ9Y2S0 133 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 EDF1O60869 148 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 VAV1P15498 845 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 MANFP55145 182 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 TSNQ15631 228 aaKnown RBP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.9□□□□□ -0.02
C9orf47-201ENST00000334490 SNX20Q7Z614 316 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 CRYGNQ8WXF5 182 aa14.9□□□□□ -0.02
C9orf47-201ENST00000334490 NUS1Q96E22 293 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms