RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 LTB4R2Q9NPC1 389 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 RBM22Q9NW64 420 aaKnown RBP eCLIP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 GMIPQ9P107 970 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 DICER1Q9UPY3 1922 aaKnown RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 H0YAE9 185 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 GNGT2O14610 69 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 MYO1DO94832 1006 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 RCVRNP35243 200 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 ARL1P40616 181 aaPredicted RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 TPTEP56180 551 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 ITKQ08881 620 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 KCNJ8Q15842 424 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 MEP1AQ16819 746 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 TIGD2Q4W5G0 525 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 PYCR3Q53H96 274 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 XAF1Q6GPH4 301 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 USP51Q70EK9 711 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 LEMD2Q8NC56 503 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 STARD8Q92502 1023 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 GLMNQ92990 594 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 NT5C3BQ969T7 300 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 WDR12Q9GZL7 423 aaKnown RBP13.66□□□□□ -0.22
SYNE3-201ENST00000334258 GLOD4Q9HC38 313 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 POLE4Q9NR33 117 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 SLAMF8Q9P0V8 285 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 CARD8Q9Y2G2 431 aa13.66□□□□□ -0.22
SYNE3-201ENST00000334258 A8MU76 341 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 TBC1D4O60343 1298 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 CDK14O94921 469 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 MZF1P28698 734 aaPredicted RBP13.65□□□□□ -0.22
SYNE3-201ENST00000334258 RPS3AP61247 264 aaKnown RBP13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ECT2LQ008S8 904 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 KCNC4Q03721 635 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
SYNE3-201ENST00000334258 FAM209AQ5JX71 171 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 SPRYD7Q5W111 196 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ADCK1Q86TW2 530 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ZDHHC13Q8IUH4 622 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF555Q8NEP9 628 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 CALML6Q8TD86 181 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 TMBIM1Q969X1 311 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 NSUN5Q96P11 429 aaKnown RBP13.65□□□□□ -0.22
SYNE3-201ENST00000334258 SPC25Q9HBM1 224 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 WDR6Q9NNW5 1121 aaKnown RBP13.65□□□□□ -0.22
SYNE3-201ENST00000334258 FLRT1Q9NZU1 646 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 TRIM64BA6NI03 449 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 CCDC154A6NI56 674 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 SYCE1LA8MT33 242 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 H3BRB1 525 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 CRHBPP24387 322 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 CLCN5P51795 746 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 GEMP55040 296 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 AQP6Q13520 282 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 BCL2A1Q16548 175 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ZNF484Q5JVG2 852 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 GLYATQ6IB77 296 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 OR7A2PQ8NGA2 310 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 ZFP90Q8TF47 636 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 SLC9A7Q96T83 725 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 TRIM54Q9BYV2 358 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 PDE10AQ9Y233 779 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 PCDHGA11Q9Y5H2 935 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 PCDHA9Q9Y5H5 950 aa13.65□□□□□ -0.22
SYNE3-201ENST00000334258 PFDN6O15212 129 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 RECQL4O94761 1208 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 NADKO95544 446 aaPredicted RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 UMPSP11172 480 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 HERVK_113P63132 956 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 CCNA1P78396 465 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 YWHAHQ04917 246 aaPredicted RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 GALNT1Q10472 559 aaPredicted RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 DAG1Q14118 895 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 MAPRE1Q15691 268 aaKnown RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 FSCN1Q16658 493 aaKnown RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 INTS6LQ5JSJ4 861 aaKnown RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 PAGE3Q5JUK9 113 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 KIAA0930Q6ICG6 404 aaPredicted RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 ERVK-6Q9BXR3 956 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 TOR3AQ9H497 397 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 NXF3Q9H4D5 531 aaKnown RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 SMURF2Q9HAU4 748 aa13.65□□□□□ -0.23
SYNE3-201ENST00000334258 SEMA4BQ9NPR2 832 aaPredicted RBP13.65□□□□□ -0.23
SYNE3-201ENST00000334258 ANK1P16157 1881 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 NOBOXO60393 691 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 HTR1BP28222 390 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 IST1P53990 364 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
SYNE3-201ENST00000334258 GTF2IRD2BQ6EKJ0 949 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 DENND5AQ6IQ26 1287 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 ISCA2Q86U28 154 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 GTF2IRD2Q86UP8 949 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 TTC16Q8NEE8 873 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 ANKK1Q8NFD2 765 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 NTAN1Q96AB6 310 aa13.64□□□□□ -0.23
SYNE3-201ENST00000334258 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms