RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 XAF1Q6GPH4 301 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 CLEC4FQ8N1N0 589 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 ZC3H15Q8WU90 426 aaKnown RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 RIC8BQ9NVN3 520 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 PAPSS2O95340 614 aaPredicted RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 PCNAP12004 261 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 ZNF37AP17032 561 aaPredicted RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 NR4A1P22736 598 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 HOXC13P31276 330 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 OR4D2P58180 307 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 PTPRCAPQ14761 206 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 POLD3Q15054 466 aaPredicted RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 MANEALQ5VSG8 457 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 GALNT7Q86SF2 657 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 C3orf58Q8NDZ4 430 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 GPRC5AQ8NFJ5 357 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 IMP4Q96G21 291 aaKnown RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 CSF3RQ99062 836 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 WARS2Q9UGM6 360 aaKnown RBP23.47■■□□□ 1.35
TSKU-201ENST00000333090 CDH9Q9ULB4 789 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 WDR37Q9Y2I8 494 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 PCDHGA11Q9Y5H2 935 aa23.47■■□□□ 1.35
TSKU-201ENST00000333090 TRIM43BA6NCK2 446 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 SUPT3HB4E1H0 165 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 PDHXO00330 501 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 SLC2A3P11169 496 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 LCP2Q13094 533 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 C9orf131Q5VYM1 1079 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 C14orf80Q86SX3 495 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 IGFN1Q86VF2 1251 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 TMEM86AQ8N2M4 240 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 LEMD2Q8NC56 503 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 ATP13A1Q9HD20 1204 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 GMIPQ9P107 970 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 NYNRINQ9P2P1 1898 aaKnown RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 IGLV3-25P01717 112 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 IL7RP16871 459 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 HALP42357 657 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 EEFSECP57772 596 aaKnown RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 TIAL1Q01085 375 aaKnown RBP eCLIP23.46■■□□□ 1.35
TSKU-201ENST00000333090 SLC10A7Q0GE19 358 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 IHHQ14623 411 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 DUSP28Q4G0W2 176 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 TFAP2DQ7Z6R9 452 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 STK32CQ86UX6 486 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 RALGPS2Q86X27 583 aaPredicted RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 RTL3Q8N8U3 475 aaKnown RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 NSMCE2Q96MF7 247 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 ATOH8Q96SQ7 321 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 RAD21L1Q9H4I0 556 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 LEF1Q9UJU2 399 aaPredicted RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 MIA3Q5JRA6 1907 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 MROH6A6NGR9 719 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 EEDO75530 441 aaKnown RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 TCF3P15923 654 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 JUNBP17275 347 aaPredicted RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 HABP4Q5JVS0 413 aaKnown RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 R3HCC1LQ7Z5L2 792 aaKnown RBP23.46■■□□□ 1.35
TSKU-201ENST00000333090 PDPRQ8NCN5 879 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 NTN4Q9HB63 628 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 DGKBQ9Y6T7 804 aa23.46■■□□□ 1.35
TSKU-201ENST00000333090 DYTNA2CJ06 578 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 E9PAM4 449 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 J3KR12 359 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 ABCB7O75027 752 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 SLC22A3O75751 556 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 BRMS1LQ5PSV4 323 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 GLYATQ6IB77 296 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 DPP9Q86TI2 863 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 TMEM199Q8N511 208 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 TMBIM1Q969X1 311 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 CSNK1G1Q9HCP0 422 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 AIG1Q9NVV5 245 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 PRDX3P30048 256 aaKnown RBP23.45■■□□□ 1.34
TSKU-201ENST00000333090 ZFP36L2P47974 494 aaKnown RBP23.45■■□□□ 1.34
TSKU-201ENST00000333090 ALDH3A2P51648 485 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 POLR2JP52435 117 aaKnown RBP23.45■■□□□ 1.34
TSKU-201ENST00000333090 PLA2G16P53816 162 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 TRIM16LQ309B1 348 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 SIRPB2Q5JXA9 342 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 TMCO5AQ8N6Q1 288 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 NAT16Q8N8M0 369 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 BPIFB1Q8TDL5 484 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 TSPEARQ8WU66 669 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 CASP10Q92851 521 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 SLC10A4Q96EP9 437 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 GPN2Q9H9Y4 310 aaPredicted RBP23.45■■□□□ 1.34
TSKU-201ENST00000333090 SUN2Q9UH99 717 aa23.45■■□□□ 1.34
TSKU-201ENST00000333090 VPS4BO75351 444 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 GLP2RO95838 553 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 PEX11BO96011 259 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 THRBP10828 461 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 PGFP49763 221 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 RENBPP51606 427 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 FBXO39Q8N4B4 442 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 ABHD8Q96I13 439 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 TDRD1Q9BXT4 1180 aaKnown RBP23.44■■□□□ 1.34
TSKU-201ENST00000333090 UXTQ9UBK9 157 aaPredicted RBP23.44■■□□□ 1.34
TSKU-201ENST00000333090 SEPT3Q9UH03 358 aa23.44■■□□□ 1.34
TSKU-201ENST00000333090 NCF1BA6NI72 391 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms