RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 HSF2Q03933 536 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 TNK2Q07912 1038 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 ZNF460Q14592 562 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 RRP1BQ14684 758 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 LSM12Q3MHD2 195 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 CPTPQ5TA50 214 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 TCEAL6Q6IPX3 200 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 ZZZ3Q8IYH5 903 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 AUTS2Q8WXX7 1259 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 TRMT61BQ9BVS5 477 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 ADAM7Q9H2U9 754 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 SPAG4Q9NPE6 437 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 ATG13O75143 517 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 OTCP00480 354 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 IFNGP01579 166 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 CBLP22681 906 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 CREMQ03060 361 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 DUPD1Q68J44 220 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 CATSPERGQ6ZRH7 1159 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 HERVK_113Q902F9 699 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 IL12RB2Q99665 862 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 TDRD1Q9BXT4 1180 aaKnown RBP10.52□□□□□ -0.73
CLN8-201ENST00000331222 FTHL17Q9BXU8 183 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 C3orf14Q9HBI5 128 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 HCN3Q9P1Z3 774 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 DEC1Q9P2X7 70 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 MBD2Q9UBB5 411 aa10.52□□□□□ -0.73
CLN8-201ENST00000331222 A0A0X1KG70 313 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SUV39H1O43463 412 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 BPNT1O95861 308 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 COX4I1P13073 169 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 MOXD1Q6UVY6 613 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 MEIOBQ8N635 442 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 OR5B17Q8NGF7 314 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SUN3Q8TAQ9 357 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 NAT14Q8WUY8 206 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 STOML2Q9UJZ1 356 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 PXDNLA1KZ92 1463 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 AKAP8O43823 692 aaKnown RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 APOC2P02655 101 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SLC6A9P48067 706 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 PUM1Q14671 1186 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLN8-201ENST00000331222 C9orf57Q5W0N0 161 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ZCCHC9Q8N567 271 aaKnown RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 SGCDQ92629 289 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SLC25A23Q9BV35 468 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 RPTORQ8N122 1335 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ALDH3A2P51648 485 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ACLYP53396 1101 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 PLA2G16P53816 162 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 RIPK1Q13546 671 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 XKR4Q5GH76 650 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 RGMBQ6NW40 437 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 C1orf94Q6P1W5 598 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 KYAT3Q6YP21 454 aaKnown RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 GPR180Q86V85 440 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 IQCHQ86VS3 1027 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 RIOX2Q8IUF8 465 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SPPL2CQ8IUH8 684 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ARL14EPQ8N8R7 260 aaPredicted RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 MYDGFQ969H8 173 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 APOLD1Q96LR9 279 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 MORF4L1Q9UBU8 362 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 MRTO4Q9UKD2 239 aaKnown RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 TTC34A8MYJ7 566 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 HAT1O14929 419 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SCGB1D2O95969 90 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 MARCKSL1P49006 195 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ODF4Q2M2E3 257 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ATAT1Q5SQI0 421 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 GRHL3Q8TE85 626 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 RIPOR3Q96MK2 946 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 AIF1LQ9BQI0 150 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 DNAJC28Q9NX36 388 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 NOX1Q9Y5S8 564 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 LOC110117498-PIK3R3F6TDL0 507 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 S100A9P06702 114 aaKnown RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 HSPA7P48741 367 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 TRAP1Q12931 704 aaKnown RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 PEX6Q13608 980 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SWI5Q1ZZU3 235 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ATXN7L2Q5T6C5 722 aaPredicted RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 RBFAQ8N0V3 343 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 LEF1Q9UJU2 399 aaPredicted RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 ARHGEF33A8MVX0 844 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 TULP3O75386 442 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 TCF4P15884 667 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 CTSKP43235 329 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 RDH11Q8TC12 318 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 PPP3R2Q96LZ3 170 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 ACE2Q9BYF1 805 aaPredicted RBP10.51□□□□□ -0.73
CLN8-201ENST00000331222 ANKZF1Q9H8Y5 726 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 SNX15Q9NRS6 342 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 MALT1Q9UDY8 824 aa10.51□□□□□ -0.73
CLN8-201ENST00000331222 LOC100509620A0A075B734 347 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms