RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HECTD2Q5U5R9 776 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 FOXB2Q5VYV0 432 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 ERAP2Q6P179 960 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 TRMT11Q7Z4G4 463 aaKnown RBP15.79■□□□□ 0.12
PDGFB-201ENST00000331163 OR8D1Q8WZ84 308 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 OCEL1Q9H607 264 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 TBC1D30Q9Y2I9 924 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 IRAK3Q9Y616 596 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 IGLV3-10A0A075B6K4 115 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF487B1APH4 448 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 GSC2O15499 205 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 ALDOAP04075 364 aaKnown RBP15.79■□□□□ 0.12
PDGFB-201ENST00000331163 GJA4P35212 333 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 RBBP7Q16576 425 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDGFB-201ENST00000331163 EGFLAMQ63HQ2 1017 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 KDELC1Q6UW63 502 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 SAMD11Q96NU1 681 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 RBBP8Q99708 897 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 BTBD10Q9BSF8 475 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 MIR1-1HGQ9H1L0 117 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 GPC4O75487 556 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 PCCBP05166 539 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 GCAP28676 217 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 GPR1P46091 355 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ATXN3P54252 364 aaPredicted RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 POLR2LP62875 67 aaKnown RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 RPS6KA2Q15349 733 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 PDK4Q16654 411 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 C6orf163Q5TEZ5 329 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 VWA5B1Q5TIE3 1220 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 C1orf146Q5VVC0 180 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 UBE2Q1Q7Z7E8 422 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 CEP97Q8IW35 865 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 AHI1Q8N157 1196 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ABTB1Q969K4 478 aaPredicted RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 AP2M1Q96CW1 435 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 NSL1Q96IY1 281 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ACAT2Q9BWD1 397 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 TMEM120AQ9BXJ8 343 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 MEI4A8MW99 385 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 E7ESA3 106 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ZWINTO95229 277 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 LMNAP02545 664 aaKnown RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 PPARGP37231 505 aaPredicted RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 MTA1Q13330 715 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 DENND5AQ6IQ26 1287 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 PAQR3Q6TCH7 311 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 VITQ6UXI7 678 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 BNIPLQ7Z465 357 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ALYREFQ86V81 257 aaKnown RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 HDDC3Q8N4P3 179 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 TXNDC5Q8NBS9 432 aaKnown RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 OSCP1Q8WVF1 389 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 FEM1CQ96JP0 617 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 RIOK2Q9BVS4 552 aaKnown RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 SEMA4BQ9NPR2 832 aaPredicted RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 TAS2R13Q9NYV9 303 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 GLRA3O75311 464 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 CIB2O75838 187 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 S100BP04271 92 aaPredicted RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ASPHQ12797 758 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ITPRIPL2Q3MIP1 535 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ATG16L1Q676U5 607 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 KBTBD2Q8IY47 623 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 EFCAB3Q8N7B9 438 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 PPP1R2P1Q96PQ5 205 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 ACE2Q9BYF1 805 aaPredicted RBP15.78■□□□□ 0.12
PDGFB-201ENST00000331163 RHOJQ9H4E5 214 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 PIAS3Q9Y6X2 628 aa15.78■□□□□ 0.12
PDGFB-201ENST00000331163 MAGEA13PA6NCF6 341 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 E9PBE3 544 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 KLHL41O60662 606 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 MSH3P20585 1137 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 RAB10P61026 200 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 FOXD4Q12950 439 aaPredicted RBP15.77■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF234Q14588 700 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 PRAMEF14Q5SWL7 426 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 RAB44Q7Z6P3 723 aaPredicted RBP15.77■□□□□ 0.12
PDGFB-201ENST00000331163 LMNTD1Q8N9Z9 388 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 RLN3Q8WXF3 142 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 TUBGCP5Q96RT8 1024 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 EIF2B3Q9NR50 452 aaKnown RBP15.77■□□□□ 0.12
PDGFB-201ENST00000331163 ZMYM5Q9UJ78 669 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 NEU3Q9UQ49 428 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 FAM159BA6NKW6 160 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 ZBTB14O43829 449 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 SIX3O95343 332 aaPredicted RBP15.77■□□□□ 0.12
PDGFB-201ENST00000331163 LAMP2P13473 410 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 AQP5P55064 265 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 AP1S1P61966 158 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 BTKQ06187 659 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 SGCGQ13326 291 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 TMEM215Q68D42 235 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 OR52E8Q6IFG1 317 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 LEMD2Q8NC56 503 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 MTFMTQ96DP5 389 aaKnown RBP15.77■□□□□ 0.12
PDGFB-201ENST00000331163 GDF15Q99988 308 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 PCDH12Q9NPG4 1184 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 ZNHIT2Q9UHR6 403 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms