RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 PANX2Q96RD6 677 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 SRPK1Q96SB4 655 aaKnown RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 RBM15Q96T37 977 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMG1-201ENST00000330588 IL12RB2Q99665 862 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 MYOCQ99972 504 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 CDH19Q9H159 772 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 MBNL1Q9NR56 388 aaKnown RBP6.33□□□□□ -1.4
SMG1-201ENST00000330588 UCKL1Q9NWZ5 548 aa6.33□□□□□ -1.4
SMG1-201ENST00000330588 DMDP11532 3685 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 A0A087WV48 116 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 SRRM3A6NNA2 597 aaPredicted RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 TMX2-CTNND1H3BSU7 103 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 CACNB4O00305 520 aaPredicted RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 SDC3O75056 442 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 ECEL1O95672 775 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 CCNB1P14635 433 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 JUPP14923 745 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 GM2AP17900 193 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TAS2R40P59535 323 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 SRP54P61011 504 aaKnown RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 TRAF2Q12933 501 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 DNAJC3Q13217 504 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TFDP2Q14188 446 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 INPP5AQ14642 412 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PDK1Q15118 436 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 ALG11Q2TAA5 492 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TPRG1LQ5T0D9 272 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 FAXCQ5TGI0 409 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 HES3Q5TGS1 186 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 C11orf63Q6NUN7 778 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PNCKQ6P2M8 343 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 OGFOD3Q6PK18 319 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 SEZ6L2Q6UXD5 910 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 LSMEM2Q8N112 164 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PQLC3Q8N755 202 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PLD5Q8N7P1 536 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 ARL10Q8N8L6 244 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TC2NQ8N9U0 490 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 OR56A4Q8NGH8 313 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PIH1D2Q8WWB5 315 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TADA1Q96BN2 335 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 NUS1Q96E22 293 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 RHOVQ96L33 236 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 OLFM3Q96PB7 478 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 CHP1Q99653 195 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 WRAP53Q9BUR4 548 aaKnown RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 LRRC61Q9BV99 259 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PACSIN1Q9BY11 444 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 TEX101Q9BY14 249 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 ACSS3Q9H6R3 686 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 NOD2Q9HC29 1040 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 PHPT1Q9NRX4 125 aaPredicted RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 RAD18Q9NS91 495 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 DTLQ9NZJ0 730 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 NFKBIL1Q9UBC1 381 aaPredicted RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 B4GALT6Q9UBX8 382 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 KLQ9UEF7 1012 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 CLCA2Q9UQC9 943 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 EFR3BQ9Y2G0 817 aa6.32□□□□□ -1.4
SMG1-201ENST00000330588 COL27A1Q8IZC6 1860 aaPredicted RBP6.32□□□□□ -1.4
SMG1-201ENST00000330588 CNOT1A5YKK6 2376 aaKnown RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 A0A0J9YYE9 177 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TRABD2BA6NFA1 517 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 CAPN8A6NHC0 703 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 GPR89AB7ZAQ6 455 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 NTN3O00634 580 aaPredicted RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 APOL1O14791 398 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 PPP1R12AO14974 1030 aaPredicted RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 MT-CO3P00414 261 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TNFP01375 233 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TRBC1P01850 177 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 IVLP07476 585 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 CD48P09326 243 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 GPR89BP0CG08 455 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TGM2P21980 687 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 CYLC1P35663 651 aaPredicted RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 SSR1P43307 286 aaKnown RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 ADKP55263 362 aaKnown RBP6.31□□□□□ -1.4
SMG1-201ENST00000330588 ERVPABLB-1P60509 514 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 ARHGEF7Q14155 803 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 MAP7Q14244 749 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 MESDQ14696 234 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 NR1D2Q14995 579 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 CNGA3Q16281 694 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 LRRC73Q5JTD7 316 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 OGFOD2Q6N063 350 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TECPR1Q7Z6L1 1165 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TMTC1Q8IUR5 882 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 SULF2Q8IWU5 870 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 CCDC13Q8IYE1 715 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 KATNAL2Q8IYT4 538 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 TXLNBQ8N3L3 684 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 POU5F2Q8N7G0 328 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 ARRDC2Q8TBH0 407 aa6.31□□□□□ -1.4
SMG1-201ENST00000330588 DTX3LQ8TDB6 740 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms