RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 EDARQ9UNE0 448 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SNX10Q9Y5X0 201 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 KCNU1A8MYU2 1149 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 TBX1O43435 398 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SLC6A2P23975 617 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ITPKBP27987 946 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CSTF1Q05048 431 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 SP140Q13342 867 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 HJURPQ8NCD3 748 aaPredicted RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 REPS2Q8NFH8 660 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SENP8Q96LD8 212 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 POPDC2Q9HBU9 364 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 C5orf51A6NDU8 294 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 LRIG2O94898 1065 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 REP15Q6BDI9 236 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 METTL7BQ6UX53 244 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ANKS1BQ7Z6G8 1248 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 JAZF1Q86VZ6 243 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ANKRD46Q86W74 232 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CCDC88AQ3V6T2 1871 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ISM1B1AKI9 464 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 GRIN3BO60391 1043 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PRKD3O94806 890 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ATP5BP06576 529 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 TTKP33981 857 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CLK3P49761 638 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 SH3RF1Q7Z6J0 888 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CFAP52Q8N1V2 620 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 RBM15BQ8NDT2 890 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 FAM84AQ96KN4 292 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ITM2CQ9NQX7 267 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ST3GAL5Q9UNP4 418 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 HPSEQ9Y251 543 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FXYD6-FXYD2A0A087WZ82 144 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 IPO13O94829 963 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 PLATP00750 562 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 HSD3B2P26439 372 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PGDP52209 483 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PPIL2Q13356 520 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 MAMLD1Q13495 774 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ADGRE1Q14246 886 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ZNF567Q8N184 647 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 KCNC2Q96PR1 638 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ADAM2Q99965 735 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FXYD6Q9H0Q3 95 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 LIN28AQ9H9Z2 209 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 ATP13A4Q4VNC1 1196 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 INTS11Q5TA45 600 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 ACE2Q9BYF1 805 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 SEMA3GQ9NS98 782 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 INTS7Q9NVH2 962 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 GULP1Q9UBP9 304 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 IKZF2Q9UKS7 526 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TRHDEQ9UKU6 1024 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 NEXMIFQ5QGS0 1516 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 hCG_2039718K7EN88 272 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 WWP2O00308 870 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TRUB2O95900 331 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 ADCYAP1R1P41586 468 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PSEN2P49810 448 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CDH12P55289 794 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 MPP1Q00013 466 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 MBTD1Q05BQ5 628 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CPTPQ5TA50 214 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 LINGO2Q7L985 606 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CADM2Q8N3J6 435 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 DTX3Q8N9I9 347 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 MINDY2Q8NBR6 621 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 APBB2Q92870 758 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 FATE1Q969F0 183 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SEMA3CQ99985 751 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 IRAK3Q9Y616 596 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 VIRMAQ69YN4 1812 aaKnown RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 CLDN5O00501 218 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SEPT4O43236 478 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CHP2O43745 196 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PLIN3O60664 434 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 NPR2P20594 1047 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 SKP1P63208 163 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 WSCD2Q2TBF2 565 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 BTBD16Q32M84 506 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PPM1JQ5JR12 505 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 PPP1R16AQ96I34 528 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 FAIM2Q9BWQ8 316 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 ZNF214Q9UL59 606 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 GRIP1Q9Y3R0 1128 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 TPST2O60704 377 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 NOL4O94818 638 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 MCCD1P59942 119 aaPredicted RBP7.86□□□□□ -1.15
CIITA-201ENST00000324288 BNIP2Q12982 314 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 PTPRNQ16849 979 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 MOXD1Q6UVY6 613 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 LPGAT1Q92604 370 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 COQ10BQ9H8M1 238 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 EFCAB9A8MZ26 197 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 E9PAM4 449 aa7.86□□□□□ -1.15
CIITA-201ENST00000324288 CTNNB1P35222 781 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms